RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 DUX4L4P0CJ87 422 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 DUX4L5P0CJ88 424 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 DUX4L6P0CJ89 424 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 DUX4L7P0CJ90 424 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 GLRA1P23415 457 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 TGM4P49221 684 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 BPIFB3P59826 476 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ISL1P61371 349 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ELF3P78545 371 aaPredicted RBP9.84□□□□□ -0.83
HMGN1-213ENST00000482192 IL13RA1P78552 427 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ZNF85Q03923 595 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 IKZF1Q13422 519 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ODF4Q2M2E3 257 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 TP53I3Q53FA7 332 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 LRRC10Q5BKY1 277 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 DMRTC1Q5HYR2 192 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 GPR157Q5UAW9 335 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 DUX4L9Q6RFH8 374 aaPredicted RBP9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ZBTB49Q6ZSB9 765 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 KCTD20Q7Z5Y7 419 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ZNF573Q86YE8 665 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ZDHHC22Q8N966 263 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 CCDC54Q8NEL0 328 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 OR5T2Q8NGG2 359 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ANGPTL6Q8NI99 470 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 AQP3Q92482 292 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 TMIGD2Q96BF3 282 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 MED30Q96HR3 178 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 WDFY2Q96P53 400 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ADI1Q9BV57 179 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ZMAT3Q9HA38 289 aaKnown RBP9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ESM1Q9NQ30 184 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 ACOXLQ9NUZ1 547 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 NLKQ9UBE8 527 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 DUX4Q9UBX2 424 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 RPUSD1Q9UJJ7 312 aaKnown RBP9.84□□□□□ -0.83
HMGN1-213ENST00000482192 POLDIP2Q9Y2S7 368 aa9.84□□□□□ -0.83
HMGN1-213ENST00000482192 PQLC2LA1A4F0 135 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 ANKRD61A6NGH8 418 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 J3QRE1 110 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 J3QT63 122 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 SLC16A6O15403 523 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 BAG2O95816 211 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 UBCP0CG48 685 aaKnown RBP9.83□□□□□ -0.84
HMGN1-213ENST00000482192 MMP9P14780 707 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 AMY2BP19961 511 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 HAAOP46952 286 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 UBA52P62987 128 aaKnown RBP9.83□□□□□ -0.84
HMGN1-213ENST00000482192 PDCD1Q15116 288 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 ZSCAN26Q16670 478 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 SMIM21Q3B7S5 101 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 CDONQ4KMG0 1287 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 ZNF788Q6ZQV5 615 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 ENTHD1Q8IYW4 607 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 PRSS35Q8N3Z0 413 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 ACBD7Q8N6N7 88 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 DMRTB1Q96MA1 342 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 Q96MT0 163 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 GAFA1Q96PS6 74 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 TBX15Q96SF7 602 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 MYCBPQ99417 103 aaPredicted RBP9.83□□□□□ -0.84
HMGN1-213ENST00000482192 SLC29A1Q99808 456 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 SIRPDQ9H106 197 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 GPR173Q9NS66 373 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 RASL12Q9NYN1 266 aa9.83□□□□□ -0.84
HMGN1-213ENST00000482192 LOC100130705A0A1B0GUX0 176 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 LOC107986453A0A1B0GWG9 222 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 DNAJC9-AS1A6NH13 148 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 A6NIN4 97 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 SIGLEC5O15389 551 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 GATBO75879 557 aaKnown RBP9.82□□□□□ -0.84
HMGN1-213ENST00000482192 ACAA1P09110 424 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-213ENST00000482192 GABRB1P18505 474 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 PRTN3P24158 256 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 ACTA2P62736 377 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 ACTG2P63267 376 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 ZNF91Q05481 1191 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 BAMBIQ13145 260 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 DGUOKQ16854 277 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 C12orf54Q6X4T0 127 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 BRD3OSQ6XYD6 125 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 CMTM4Q8IZR5 234 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 FGFRL1Q8N441 504 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 POC1AQ8NBT0 407 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 LY6G5BQ8NDX9 201 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 GCDHQ92947 438 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-213ENST00000482192 C10orf35Q96D05 121 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 MRPL48Q96GC5 212 aaKnown RBP9.82□□□□□ -0.84
HMGN1-213ENST00000482192 ZNF48Q96MX3 618 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-213ENST00000482192 RDH12Q96NR8 316 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 CHST5Q9GZS9 411 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 CNTD2Q9H8S5 307 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 FAM118AQ9NWS6 357 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 SMPD3Q9NY59 655 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-213ENST00000482192 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-213ENST00000482192 SLC25A10Q9UBX3 287 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-213ENST00000482192 SLC7A11Q9UPY5 501 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 EXOGQ9Y2C4 368 aaKnown RBP9.82□□□□□ -0.84
HMGN1-213ENST00000482192 KPTNQ9Y664 436 aa9.82□□□□□ -0.84
HMGN1-213ENST00000482192 ARHGAP32A7KAX9 2087 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms