RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 RAB1BQ9H0U4 201 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 ELOVL5Q9NYP7 299 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 DHRS7CA6NNS2 312 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 CCL2P13500 99 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 CBR1P16152 277 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 ALDH3B1P43353 468 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 CAV2P51636 162 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 SLC7A6Q92536 515 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 PTX4Q96A99 478 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 SEH1LQ96EE3 360 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 DIRC2Q96SL1 478 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 TRIM64BA6NI03 449 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 KIR3DL2P43630 455 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 GK2Q14410 553 aaPredicted RBP16.89■□□□□ 0.29
CCM2-214ENST00000481194 OR5D13Q8NGL4 314 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 SLA2Q9H6Q3 261 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 ANGPTL7O43827 346 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 PDCD6O75340 191 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 PNPP00491 289 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 HOXB5P09067 269 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 OR3A4PP47883 348 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 INSL4Q14641 139 aa16.89■□□□□ 0.29
CCM2-214ENST00000481194 TRBV5-5A0A0J9YX44 114 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 SMCO3A2RU48 225 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 PHF1O43189 567 aaPredicted RBP16.88■□□□□ 0.29
CCM2-214ENST00000481194 APOA2P02652 100 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 TTRP02766 147 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 ZNF92Q03936 586 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 CACFD1Q9UGQ2 172 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 OSGIN2Q9Y236 505 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 CPN1P15169 458 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 ZNF767PQ75MW2 155 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 MRPL22Q9NWU5 206 aaKnown RBP16.88■□□□□ 0.29
CCM2-214ENST00000481194 NDUFB3O43676 98 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 LINC01590Q5TEZ4 76 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 FBXW12Q6X9E4 464 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 SUMF1Q8NBK3 374 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 MFFQ9GZY8 342 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 ZNF552Q9H707 407 aaPredicted RBP16.88■□□□□ 0.29
CCM2-214ENST00000481194 TRGV10A0A0A0MS01 117 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 LGALS4P56470 323 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 ZNF468Q5VIY5 522 aaPredicted RBP16.88■□□□□ 0.29
CCM2-214ENST00000481194 DMBX1Q8NFW5 382 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 RNF122Q9H9V4 155 aa16.88■□□□□ 0.29
CCM2-214ENST00000481194 A0A0D9SG52 128 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 OR5H8P0DN80 308 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 KCNJ3P48549 501 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 DHODHQ02127 395 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 KCNMB1Q16558 191 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 RFPL4BQ6ZWI9 263 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 SKA3Q8IX90 412 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 SPAG16Q8N0X2 631 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 ZNF107Q9UII5 783 aaPredicted RBP16.87■□□□□ 0.29
CCM2-214ENST00000481194 TRIM64A6NGJ6 449 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 SNRPGP15A8MWD9 76 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 J3QT63 122 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 GSTZ1O43708 216 aaPredicted RBP16.87■□□□□ 0.29
CCM2-214ENST00000481194 IFNA1P01562 189 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 HFEQ30201 348 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 DCTN6O00399 190 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 TMEM91Q6ZNR0 172 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 NAA40Q86UY6 237 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 CXorf67Q86X51 503 aaPredicted RBP16.87■□□□□ 0.29
CCM2-214ENST00000481194 GPX8Q8TED1 209 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 SGK3Q96BR1 496 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 TMEM246Q9BRR3 403 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 FOXD3Q9UJU5 478 aaPredicted RBP16.87■□□□□ 0.29
CCM2-214ENST00000481194 CEBPGP53567 150 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 STOML3Q8TAV4 291 aa16.87■□□□□ 0.29
CCM2-214ENST00000481194 OPN3Q9H1Y3 402 aaPredicted RBP16.87■□□□□ 0.29
CCM2-214ENST00000481194 LIN7CQ9NUP9 197 aaKnown RBP16.87■□□□□ 0.29
CCM2-214ENST00000481194 PTPRZ1P23471 2315 aaPredicted RBP16.86■□□□□ 0.29
CCM2-214ENST00000481194 A0A1B0GUH1 482 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 CEBPZOSA8MTT3 80 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 ARPC5O15511 151 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 HRH1P35367 487 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 ABLIM2Q6H8Q1 611 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 SLC38A6Q8IZM9 456 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 PRR7Q8TB68 274 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 LHFPL6Q9Y693 200 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 TUBAL3A6NHL2 446 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 HSD17B6O14756 317 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 PLA1AQ53H76 456 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 SCCPDHQ8NBX0 429 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 C1orf162Q8NEQ5 155 aaPredicted RBP16.86■□□□□ 0.29
CCM2-214ENST00000481194 PRDM14Q9GZV8 571 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 MTFP1Q9UDX5 166 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 ZDBF2Q9HCK1 2354 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 GMDSO60547 372 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 CD3DP04234 171 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 PTAFRP25105 342 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 BATF2Q8N1L9 274 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 LRRC29Q8WV35 223 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 GALMQ96C23 342 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 SDHAF2Q9NX18 166 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 SFRP5Q5T4F7 317 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 OR4A16Q8NH70 328 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 SLC25A40Q8TBP6 338 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 OR2S2Q9NQN1 319 aa16.86■□□□□ 0.29
CCM2-214ENST00000481194 PRSS50Q9UI38 385 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms