RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173		H3BN98	237 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173		K7ERQ8	282 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	PRMT5	O14744	637 aa	Predicted RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	POLR3G	O15318	223 aa	Predicted RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	RAD1	O60671	282 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	GATB	O75879	557 aa	Known RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SCO1	O75880	301 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	TDP2	O95551	362 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	TTC4	O95801	387 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	GCG	P01275	180 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	RPN2	P04844	631 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	CRYGC	P07315	174 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SRM	P19623	302 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	CSNK2A2	P19784	350 aa	Predicted RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	CSK	P41240	450 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	RBM34	P42696	430 aa	Known RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	RANBP1	P43487	201 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	PPIC	P45877	212 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR1G1	P47890	313 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	PSMB2	P49721	201 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	UBE2E1	P51965	193 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	TAS2R39	P59534	338 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	UBE2M	P61081	183 aa	Known RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	RPS23	P62266	143 aa	Known RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	TNNC1	P63316	161 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SLC35B1	P78383	322 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SEMG2	Q02383	582 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	PPID	Q08752	370 aa	Known RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SIGLEC14	Q08ET2	396 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	LAMTOR4	Q0VGL1	99 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	ST3GAL4	Q11206	333 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	NAB1	Q13506	487 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF726P1	Q15940	193 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	ATP6V1F	Q16864	119 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	C5orf64	Q2M2E5	130 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF829	Q3KNS6	432 aa	Predicted RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	DUPD1	Q68J44	220 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR2T5	Q6IEZ7	315 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SLC25A25	Q6KCM7	469 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	C12orf54	Q6X4T0	127 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	RTL4	Q6ZR62	310 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173		Q6ZSR3	168 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SSX6	Q7RTT6	188 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	PID1	Q7Z2X4	250 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	MDP1	Q86V88	176 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	ERO1B	Q86YB8	467 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SLC30A8	Q8IWU4	369 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SYCE1	Q8N0S2	351 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	NPW	Q8N729	165 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR51L1	Q8NGJ5	315 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR1J4	Q8NGS1	313 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR2T29	Q8NH02	315 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR51F2	Q8NH61	342 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	IFT81	Q8WYA0	676 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SGTB	Q96EQ0	304 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	SCGB3A2	Q96PL1	93 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR2M4	Q96R27	311 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	TSNAX	Q99598	290 aa	Known RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	KCNS3	Q9BQ31	491 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	COPS4	Q9BT78	406 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	EMC6	Q9BV81	110 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	API5	Q9BZZ5	524 aa	Known RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	GOLPH3	Q9H4A6	298 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	KIR3DX1	Q9H7L2	352 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	TMEM27	Q9HBJ8	222 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	ACP6	Q9NPH0	428 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	ASF1B	Q9NVP2	202 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	VAPA	Q9P0L0	249 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	MCTS1	Q9ULC4	181 aa	Known RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	RCL1	Q9Y2P8	373 aa	Known RBP	0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	KPTN	Q9Y664	436 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	TNIK	Q9UKE5	1360 aa		0.92	□□□□□ -2.26
CCNL1-223	ENST00000481173	IGLV10-54	A0A075B6I4	117 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	TRAV8-4	A0A0B4J246	113 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	IGHV1-69D	A0A0B4J2H0	117 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173		A0A0J9YXV3	536 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	LOC100506127	A0A0U1RQW1	187 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	ERICH2	A1L162	156 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	DFFA	O00273	331 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF593	O00488	134 aa	Predicted RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	NME4	O00746	187 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	TAAR5	O14804	337 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	SIVA1	O15304	175 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	SLC16A7	O60669	478 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	SCEL	O95171	688 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	PLEKHA8P1	O95397	391 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	CD160	O95971	181 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173		P01737	135 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	IGKV1-16	P04430	117 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	KLK1	P06870	262 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	SLC35G6	P0C7Q6	338 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	GIMD1	P0DJR0	217 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	IFI30	P13284	250 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	CTRB1	P17538	263 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	BGN	P21810	368 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	USF1	P22415	310 aa	Predicted RBP	0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	PRKACB	P22694	351 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	IVD	P26440	423 aa		0.91	□□□□□ -2.26
CCNL1-223	ENST00000481173	APLNR	P35414	380 aa		0.91	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms