RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 ZNF404Q494X3 552 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 FAM209AQ5JX71 171 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 TMEM200AQ86VY9 491 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 ZNF573Q86YE8 665 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 SAXO1Q8IYX7 474 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 JAGN1Q8N5M9 183 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 Q8NFD4 153 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 PXT1Q8NFP0 134 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 OR8S1Q8NH09 359 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 NPRL2Q8WTW4 380 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 IGFBPL1Q8WX77 278 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 GTF3AQ92664 365 aaKnown RBP14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 DVL3Q92997 716 aaPredicted RBP14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 C14orf79Q96F83 325 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 SPACA5Q96QH8 159 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 MS4A5Q9H3V2 200 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 CBLN4Q9NTU7 201 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 FAIMQ9NVQ4 179 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 IL19Q9UHD0 177 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 DAPK2Q9UIK4 370 aa14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 UTP20O75691 2785 aaKnown RBP14.3□□□□□ -0.12
SCAMP3-207ENST00000480219 ROS1P08922 2347 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 FAM230AA0A1W2PPH8 454 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 A1L4Q6 167 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 LDLRAD4O15165 306 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 CD8AP01732 235 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 UBBP0CG47 229 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 SLC2A2P11168 524 aaPredicted RBP14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 PTGFRP43088 359 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 GPM6AP51674 278 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 QRFPP83859 136 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 ZNF154Q13106 437 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 PDZK1IP1Q13113 114 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 RAB11BQ15907 218 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 DMRTC1Q5HYR2 192 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 AGAP6Q5VW22 663 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 CALHM1Q8IU99 346 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 PNLDC1Q8NA58 520 aaKnown RBP14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 OR10AD1Q8NGE0 317 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 TRMT10AQ8TBZ6 339 aaKnown RBP14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 TBC1D15Q8TC07 691 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 ELMOD3Q96FG2 381 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 CMTM3Q96MX0 182 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 TRAF4Q9BUZ4 470 aaPredicted RBP14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 MMP27Q9H306 513 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 PLEKHF2Q9H8W4 249 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 PLGRKTQ9HBL7 147 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 IL36GQ9NZH8 169 aa14.29□□□□□ -0.12
SCAMP3-207ENST00000480219 GCN1Q92616 2671 aaKnown RBP14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 DCHS2Q6V1P9 2916 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 F5H5P2 479 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 J3QT63 122 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 BPNT1O95861 308 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 CFHR2P36980 270 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 OR3A4PP47883 348 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 SNRPD2P62316 118 aaKnown RBP14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 IL24Q13007 206 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 PCGF3Q3KNV8 242 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 IDNKQ5T6J7 187 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 HES5Q5TA89 166 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 C11orf53Q8IXP5 236 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 ZNF295-AS1Q8N0V1 137 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 OR2Z1Q8NG97 314 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 PTX4Q96A99 478 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 MEGF10Q96KG7 1140 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 LIN7BQ9HAP6 207 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 RHOFQ9HBH0 211 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 SPATA2Q9UM82 520 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 ETV7Q9Y603 341 aa14.28□□□□□ -0.12
SCAMP3-207ENST00000480219 NOS1APO75052 506 aaPredicted RBP14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 TNFSF4P23510 183 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 SRP9P49458 86 aaKnown RBP14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 TESK1Q15569 626 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 C1QL2Q7Z5L3 287 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 ANGPTL5Q86XS5 388 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 MCFD2Q8NI22 146 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 TNFAIP8L1Q8WVP5 186 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 AQP3Q92482 292 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 ERGIC1Q969X5 290 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 FAM3DQ96BQ1 224 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 GPER1Q99527 375 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 OR5V1Q9UGF6 321 aa14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 MRPS28Q9Y2Q9 187 aaKnown RBP14.27□□□□□ -0.13
SCAMP3-207ENST00000480219 IGKV1-12A0A0C4DH73 117 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 TMEM14DPA8MWL7 114 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 CLPXO76031 633 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 IGKV1D-12P01611 117 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 SOD3P08294 240 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 HAAOP46952 286 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 C20orf204Q6ZNR8 217 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 OR2W3Q7Z3T1 314 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 CDH24Q86UP0 819 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 Q8TCH9 128 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 RFT1Q96AA3 541 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 OR2V2Q96R30 315 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 NKX3-1Q99801 234 aaPredicted RBP14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 CLEC4MQ9H2X3 399 aaPredicted RBP14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 SMURF1Q9HCE7 757 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 PKDREJQ9NTG1 2253 aa14.26□□□□□ -0.13
SCAMP3-207ENST00000480219 ARFGEF3Q5TH69 2177 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms