RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 ZNF684Q5T5D7 378 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 GPR139Q6DWJ6 353 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 C22orf42Q6IC83 251 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 ARL9Q6T311 187 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 TMEM91Q6ZNR0 172 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 TMPPEQ6ZT21 453 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 CDC20BQ86Y33 519 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 UBQLNLQ8IYU4 475 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 ZIC4Q8N9L1 334 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 MDS2Q8NDY4 140 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 OR13C5Q8NGS8 318 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 OR52N1Q8NH53 320 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 ROBO4Q8WZ75 1007 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 NSMAFQ92636 917 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 KIAA1143Q96AT1 154 aaPredicted RBP4.42□□□□□ -1.7
COMMD3-212ENST00000479958 NXPE2Q96DL1 559 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 ZHX1-C8orf76Q96EF9 292 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 C4orf36Q96KX1 117 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 UTP23Q9BRU9 249 aaKnown RBP4.42□□□□□ -1.7
COMMD3-212ENST00000479958 URM1Q9BTM9 101 aaKnown RBP4.42□□□□□ -1.7
COMMD3-212ENST00000479958 TMED9Q9BVK6 235 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 SLIRPQ9GZT3 109 aaKnown RBP4.42□□□□□ -1.7
COMMD3-212ENST00000479958 TXNL4BQ9NX01 149 aaKnown RBP4.42□□□□□ -1.7
COMMD3-212ENST00000479958 NDUFB11Q9NX14 153 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 CHCHD3Q9NX63 227 aaKnown RBP4.42□□□□□ -1.7
COMMD3-212ENST00000479958 BABAM2Q9NXR7 383 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 QPCTLQ9NXS2 382 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 SLCO1C1Q9NYB5 712 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 HAO2Q9NYQ3 351 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 CAB39Q9Y376 341 aaPredicted RBP4.42□□□□□ -1.7
COMMD3-212ENST00000479958 MOB4Q9Y3A3 225 aa4.42□□□□□ -1.7
COMMD3-212ENST00000479958 CACNA1CQ13936 2221 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 URB1O60287 2271 aaKnown RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 A0A1W2PNV4 684 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 A0A1W2PPK0 400 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 NPIPA5E9PKD4 350 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 H3BSH0 61 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 J3QRK9 145 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 K7EM74 188 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 ZNF593O00488 134 aaPredicted RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 SLC22A1O15245 554 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 CXCL13O43927 109 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 DOK2O60496 412 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 RPP14O95059 124 aaKnown RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 CDRT1O95170 752 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 OR2T7P0C7T2 308 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 LIPCP11150 499 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 EDNRAP25101 427 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 GDF1P27539 372 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 CD82P27701 267 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 GTF2E2P29084 291 aaKnown RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 SRD5A2P31213 254 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 UGT2B10P36537 528 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 EIF1P41567 113 aaKnown RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 MAGEA5P43359 124 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 SLC35A1P78382 337 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 H3F3AP84243 136 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 MXD1Q05195 221 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 SLC3A1Q07837 685 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 C3AR1Q16581 482 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 SLC35D3Q5M8T2 416 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 FAM27D1Q5T7N8 215 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 LCN1P1Q5VSP4 162 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 DMKNQ6E0U4 476 aaPredicted RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 SLC25A25Q6KCM7 469 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 C3orf33Q6P1S2 294 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 C5orf46Q6UWT4 87 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 TMPRSS11AQ6ZMR5 421 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 DPY19L4Q7Z388 723 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 GALNTL5Q7Z4T8 443 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 LINC00346Q8IVM7 164 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 DND1Q8IYX4 353 aaKnown RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 SPAG16Q8N0X2 631 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 TMEM251Q8N6I4 163 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 CLEC1AQ8NC01 280 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 FDCSPQ8NFU4 85 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 OR2T4Q8NH00 348 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 OR2T27Q8NH04 317 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 ZFAND2BQ8WV99 257 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 RGP1Q92546 391 aaPredicted RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 PHF3Q92576 2039 aaKnown RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 UFD1Q92890 307 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 PELI1Q96FA3 418 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 FER1L6-AS2Q96M78 137 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 SFXN2Q96NB2 322 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 OXGR1Q96P68 337 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 KCNS3Q9BQ31 491 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 FAM173AQ9BQD7 235 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 MRPL13Q9BYD1 178 aaKnown RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 TTTY12Q9BZ98 90 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 OR2B2Q9GZK3 357 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 DEFB127Q9H1M4 99 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 ISYNA1Q9NPH2 558 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 ACOXLQ9NUZ1 547 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 MRM2Q9UI43 246 aaKnown RBP4.41□□□□□ -1.7
COMMD3-212ENST00000479958 GNG8Q9UK08 70 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 NPIPA1Q9UND3 350 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 STUB1Q9UNE7 303 aa4.41□□□□□ -1.7
COMMD3-212ENST00000479958 HDGFL3Q9Y3E1 203 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms