RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SCRN3Q0VDG4 424 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 FHL1Q13642 323 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 RBM48Q5RL73 367 aaKnown RBP9.03□□□□□ -0.96
CCDC18-208ENST00000479653 SLC25A30Q5SVS4 291 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 TMEM236Q5W0B7 351 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 LIAT1Q6ZQX7 453 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 ADCK1Q86TW2 530 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 FAM90A1Q86YD7 464 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 Q8N2B8 174 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 IQCF1Q8N6M8 205 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 MOSPD2Q8NHP6 518 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 TMEM163Q8TC26 289 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 FBLIM1Q8WUP2 373 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 ERMAPQ96PL5 475 aaPredicted RBP9.03□□□□□ -0.96
CCDC18-208ENST00000479653 CCL13Q99616 98 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 HCAR1Q9BXC0 346 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 CDCA4Q9BXL8 241 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 PRSS22Q9GZN4 317 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 MEGF9Q9H1U4 602 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 TXNIPQ9H3M7 391 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 CMC2Q9NRP2 79 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 SCN3BQ9NY72 215 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 H2AFY2Q9P0M6 372 aaPredicted RBP9.03□□□□□ -0.96
CCDC18-208ENST00000479653 MYRFQ9Y2G1 1151 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 SF3B6Q9Y3B4 125 aaKnown RBP9.03□□□□□ -0.96
CCDC18-208ENST00000479653 IER3IP1Q9Y5U9 82 aa9.03□□□□□ -0.96
CCDC18-208ENST00000479653 A0A1B0GW55 424 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 MEGF11A6BM72 1044 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 RBMY1BA6NDE4 496 aaKnown RBP9.02□□□□□ -0.97
CCDC18-208ENST00000479653 RBMY1EA6NEQ0 496 aaKnown RBP9.02□□□□□ -0.97
CCDC18-208ENST00000479653 RENP00797 406 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 DBHP09172 617 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 RBMY1DP0C7P1 496 aaKnown RBP9.02□□□□□ -0.97
CCDC18-208ENST00000479653 DUX4L2P0CJ85 424 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 DUX4L3P0CJ86 424 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 DUX4L4P0CJ87 422 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 DUX4L5P0CJ88 424 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 DUX4L6P0CJ89 424 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 DUX4L7P0CJ90 424 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 CD200P41217 278 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 VDAC2P45880 294 aaPredicted RBP9.02□□□□□ -0.97
CCDC18-208ENST00000479653 FXYD6P3P58550 94 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 RPL27P61353 136 aaKnown RBP9.02□□□□□ -0.97
CCDC18-208ENST00000479653 IKZF1Q13422 519 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 TMED1Q13445 227 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 KHDC1LQ5JSQ8 128 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 C6orf141Q5SZD1 244 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 NCR3LG1Q68D85 454 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 DUX4L9Q6RFH8 374 aaPredicted RBP9.02□□□□□ -0.97
CCDC18-208ENST00000479653 GID4Q8IVV7 300 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 ENTHD1Q8IYW4 607 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 TCEANCQ8N8B7 351 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 LRRC75AQ8NAA5 344 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 OR4Q3Q8NH05 313 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 FNDC8Q8TC99 324 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 H1FXQ92522 213 aaKnown RBP9.02□□□□□ -0.97
CCDC18-208ENST00000479653 RBMXL1Q96E39 390 aaKnown RBP9.02□□□□□ -0.97
CCDC18-208ENST00000479653 C1orf123Q9NWV4 160 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 DUX4Q9UBX2 424 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 TPRKBQ9Y3C4 175 aa9.02□□□□□ -0.97
CCDC18-208ENST00000479653 TSSC4Q9Y5U2 329 aaPredicted RBP9.02□□□□□ -0.97
CCDC18-208ENST00000479653 hCG_1807616A0A1W2PRN6 198 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 IRGMA1A4Y4 181 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 PRR23D1E9PI22 279 aaPredicted RBP9.01□□□□□ -0.97
CCDC18-208ENST00000479653 NDUFB3O43676 98 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 GRPP07492 148 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 PRR23D2P0DMB1 279 aaPredicted RBP9.01□□□□□ -0.97
CCDC18-208ENST00000479653 CENPAP49450 140 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 RAB13P51153 203 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 EFNB1P98172 346 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 CNN3Q15417 329 aaKnown RBP9.01□□□□□ -0.97
CCDC18-208ENST00000479653 OR8G1Q15617 311 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 AANATQ16613 207 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 TMEM95Q3KNT9 176 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 ZNF826PQ6ZT77 177 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 FAM122BQ7Z309 247 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 CENPVQ7Z7K6 275 aaPredicted RBP9.01□□□□□ -0.97
CCDC18-208ENST00000479653 LINC00482Q8N8I6 264 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 OR1F12Q8NHA8 337 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 PIFOQ8TCI5 191 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 APOBEC3DQ96AK3 386 aaPredicted RBP9.01□□□□□ -0.97
CCDC18-208ENST00000479653 RCHY1Q96PM5 261 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 IL4I1Q96RQ9 567 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 METTL8Q9H825 291 aaKnown RBP9.01□□□□□ -0.97
CCDC18-208ENST00000479653 POLE4Q9NR33 117 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 PLCXD1Q9NUJ7 323 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 KAAG1Q9UBP8 84 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCDC18-208ENST00000479653 RPL36Q9Y3U8 105 aaKnown RBP9.01□□□□□ -0.97
CCDC18-208ENST00000479653 LSM4Q9Y4Z0 139 aaKnown RBP9.01□□□□□ -0.97
CCDC18-208ENST00000479653 STARD9Q9P2P6 4700 aa9.01□□□□□ -0.97
CCDC18-208ENST00000479653 MAGEA13PA6NCF6 341 aa9□□□□□ -0.97
CCDC18-208ENST00000479653 EFCAB10A6NFE3 127 aa9□□□□□ -0.97
CCDC18-208ENST00000479653 A6NLC8 198 aa9□□□□□ -0.97
CCDC18-208ENST00000479653 F2RL2O00254 374 aa9□□□□□ -0.97
CCDC18-208ENST00000479653 PRODHO43272 600 aa9□□□□□ -0.97
CCDC18-208ENST00000479653 SYNGR1O43759 233 aa9□□□□□ -0.97
CCDC18-208ENST00000479653 PRKYO43930 277 aa9□□□□□ -0.97
CCDC18-208ENST00000479653 MRPS14O60783 128 aaKnown RBP9□□□□□ -0.97
CCDC18-208ENST00000479653 HIST1H1CP16403 213 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms