RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 DUX1O43812 170 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 HBE1P02100 147 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 OR5AC1P0C628 307 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 CD79AP11912 226 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 BCKDHBP21953 392 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 FGF8P55075 233 aaPredicted RBP12.03□□□□□ -0.48
USP42-206ENST00000479544 POLR2GP62487 172 aaKnown RBP eCLIP12.03□□□□□ -0.48
USP42-206ENST00000479544 TMEM196Q5HYL7 178 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 ZNF66Q6ZN08 573 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 LFNGQ8NES3 379 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 OR5L2Q8NGL0 311 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 TVP23CQ96ET8 276 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 SMIM7Q9BQ49 75 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 FGF21Q9NSA1 209 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 ZNF275Q9NSD4 429 aaPredicted RBP12.03□□□□□ -0.48
USP42-206ENST00000479544 SERTAD4Q9NUC0 356 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 GEMIN2O14893 280 aaKnown RBP12.03□□□□□ -0.48
USP42-206ENST00000479544 CFIP05156 583 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 C17orf67Q0P5P2 114 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 DRAM2Q6UX65 266 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 SLC36A1Q7Z2H8 476 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 COMMD1Q8N668 190 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 ZNF485Q8NCK3 441 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 OR14J1Q9UGF5 321 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 ZNF749O43361 778 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 GSTP1P09211 210 aaKnown RBP12.03□□□□□ -0.48
USP42-206ENST00000479544 OR2AE1Q8NHA4 323 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 ASB13Q8WXK3 278 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 LHX4Q969G2 390 aa12.03□□□□□ -0.48
USP42-206ENST00000479544 ADAT3Q96EY9 351 aaPredicted RBP12.03□□□□□ -0.48
USP42-206ENST00000479544 HDHD3Q9BSH5 251 aaPredicted RBP12.03□□□□□ -0.48
USP42-206ENST00000479544 MPTX1A8MV57 137 aa12.02□□□□□ -0.48
USP42-206ENST00000479544 ADAM11O75078 769 aa12.02□□□□□ -0.48
USP42-206ENST00000479544 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.48
USP42-206ENST00000479544 ARTNQ5T4W7 220 aa12.02□□□□□ -0.48
USP42-206ENST00000479544 PLXDC1Q8IUK5 500 aa12.02□□□□□ -0.48
USP42-206ENST00000479544 RDH5Q92781 318 aa12.02□□□□□ -0.48
USP42-206ENST00000479544 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.48
USP42-206ENST00000479544 AICDAQ9GZX7 198 aa12.02□□□□□ -0.48
USP42-206ENST00000479544 PLCE1Q9P212 2302 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 ZNF236Q9UL36 1845 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 SCN10AQ9Y5Y9 1956 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 DOCK7Q96N67 2140 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.49
USP42-206ENST00000479544 NSG1A0A0A6YYJ2 146 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 KLK3P07288 261 aaPredicted RBP12.02□□□□□ -0.49
USP42-206ENST00000479544 CTSBP07858 339 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 COL9A1P20849 921 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 KISS1Q15726 138 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 OR5C1Q8NGR4 320 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 ANKRD9Q96BM1 317 aaPredicted RBP12.02□□□□□ -0.49
USP42-206ENST00000479544 SAT2Q96F10 170 aaPredicted RBP12.02□□□□□ -0.49
USP42-206ENST00000479544 OR10C1Q96KK4 312 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 ZNF426Q9BUY5 554 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 REG4Q9BYZ8 158 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 ESRP2Q9H6T0 727 aaKnown RBP12.02□□□□□ -0.49
USP42-206ENST00000479544 TRAV14DV4A0A0A6YYC5 116 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 A0A1B0GV90 55 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 RNF224P0DH78 156 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 CSNK1EP49674 416 aaKnown RBP12.02□□□□□ -0.49
USP42-206ENST00000479544 PNLIPRP2P54317 469 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 RAB1AP62820 205 aa12.02□□□□□ -0.49
USP42-206ENST00000479544 EP300Q09472 2414 aaPredicted RBP12.01□□□□□ -0.49
USP42-206ENST00000479544 CCDC187A0A096LP49 1063 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 HS3ST1O14792 307 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 WDR1O75083 606 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 FPR2P25090 351 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 NHLH2Q02577 135 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 PLP2Q04941 152 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 MRPL21Q7Z2W9 205 aaKnown RBP12.01□□□□□ -0.49
USP42-206ENST00000479544 PPP1R3BQ86XI6 285 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 NT5CQ8TCD5 201 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 FAM210BQ96KR6 192 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 SLC17A5Q9NRA2 495 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 PDCD11Q14690 1871 aaKnown RBP12.01□□□□□ -0.49
USP42-206ENST00000479544 A0A1W2PPV4 95 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 PDGFBP01127 241 aaPredicted RBP12.01□□□□□ -0.49
USP42-206ENST00000479544 ACAA1P09110 424 aaPredicted RBP12.01□□□□□ -0.49
USP42-206ENST00000479544 KLK2P20151 261 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 TBPP20226 339 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 ZBTB25P24278 435 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 LIMK1P53667 647 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 DOK3Q7L591 496 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 VSTM2LQ96N03 204 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 OSGIN2Q9Y236 505 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 MYLKQ15746 1914 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 CXorf65A6NEN9 183 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 KLF4O43474 513 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 RNF151Q2KHN1 245 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 LYZL2Q7Z4W2 148 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 MKXQ8IYA7 352 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 FBXL14Q8N1E6 418 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 DYRK2Q92630 601 aa12.01□□□□□ -0.49
USP42-206ENST00000479544 ALX4Q9H161 411 aaPredicted RBP12.01□□□□□ -0.49
USP42-206ENST00000479544 ANKRD36A6QL64 1941 aa12□□□□□ -0.49
USP42-206ENST00000479544 PRR32B1ATL7 298 aa12□□□□□ -0.49
USP42-206ENST00000479544 CYR61O00622 381 aa12□□□□□ -0.49
USP42-206ENST00000479544 CT45A8P0DMV1 189 aa12□□□□□ -0.49
USP42-206ENST00000479544 CT45A9P0DMV2 189 aa12□□□□□ -0.49
USP42-206ENST00000479544 MMP9P14780 707 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms