RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 BABAM2Q9NXR7 383 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 FAM30AQ9NZY2 134 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 NDRG4Q9ULP0 352 aaKnown RBP5.35□□□□□ -1.55
SF3B1-209ENST00000479532 SPATA2Q9UM82 520 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 TIMM10BQ9Y5J6 103 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 DMRT1Q9Y5R6 373 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 TMEM14AQ9Y6G1 99 aa5.35□□□□□ -1.55
SF3B1-209ENST00000479532 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 IRGMA1A4Y4 181 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 C7orf66A4D0T2 115 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 TVP23AA6NH52 213 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 A6NNC1 897 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 AIPO00170 330 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 DCTN6O00399 190 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 SGCEO43556 437 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 DOK2O60496 412 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 SC5DO75845 299 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 IGKV3-15P01624 115 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 HEXAP06865 529 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 GRPP07492 148 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 SPARCP09486 303 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 COX5BP10606 129 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 CLUP10909 449 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 FOLR2P14207 255 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF32P17041 273 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 EPHA2P29317 976 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 HTR1FP30939 366 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 HTR5AP47898 357 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 IDH3GP51553 393 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 SPCS3P61009 180 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 NCS1P62166 190 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 RPS23P62266 143 aaKnown RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 SNRPGP62308 76 aaKnown RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 RAB32Q13637 225 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 DAZAP2Q15038 168 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 RAB35Q15286 201 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 TAF13Q15543 124 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 GUCA2BQ16661 112 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 NCMAPQ5T1S8 102 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 LAIR2Q6ISS4 152 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 SLC22A25Q6T423 547 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 TMPRSS11AQ6ZMR5 421 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 CFAP77Q6ZQR2 320 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF367Q7RTV3 350 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 TMEM200AQ86VY9 491 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 SLC30A7Q8NEW0 376 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 SLC26A10Q8NG04 563 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 OR4F15Q8NGB8 312 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 OR51L1Q8NGJ5 315 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 OR6M1Q8NGM8 313 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 ASB13Q8WXK3 278 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 ST8SIA2Q92186 375 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 GTF3AQ92664 365 aaKnown RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 SPTSSAQ969W0 71 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 ZMYND19Q96E35 227 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 C14orf79Q96F83 325 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 MRPL48Q96GC5 212 aaKnown RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 FYTTD1Q96QD9 318 aaKnown RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 CNN2Q99439 309 aaKnown RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 DDOQ99489 341 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 TEAD3Q99594 435 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 C1QTNF6Q9BXI9 259 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 OR2H1Q9GZK4 316 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 TINAGL1Q9GZM7 467 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 HDHD2Q9H0R4 259 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 OPA3Q9H6K4 179 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 CDH20Q9HBT6 801 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 PLEK2Q9NYT0 353 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 COPZ2Q9P299 210 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 NUFIP1Q9UHK0 495 aaKnown RBP5.34□□□□□ -1.55
SF3B1-209ENST00000479532 LAMP5Q9UJQ1 280 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 RNF115Q9Y4L5 304 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 V9GYH0 126 aa5.34□□□□□ -1.55
SF3B1-209ENST00000479532 MYO18BQ8IUG5 2567 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 RELNP78509 3460 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 IGHV1-18A0A0C4DH31 117 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 OR6C6A6NF89 314 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF878C9JN71 531 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF670-ZNF695F2Z2N8 137 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 M0QYG6 137 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 M0R129 80 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF593O00488 134 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SELENOFO60613 162 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 MPZL1O95297 269 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 GPANK1O95872 356 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 IFNA10P01566 189 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 IGLV1-44P01699 117 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 IGHV2-70P01814 119 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SERPINA5P05154 406 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ACSM4P0C7M7 580 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 CECR9P0C854 216 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 PATE4P0C8F1 98 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SLC2A1P11166 492 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ANXA3P12429 323 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SELLP14151 372 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF250P15622 560 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 ZNF14P17017 642 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-209ENST00000479532 CCNOP22674 350 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 SLC2A5P22732 501 aa5.33□□□□□ -1.56
SF3B1-209ENST00000479532 STOMP27105 288 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms