RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SSR4P51571 173 aa21.53■■□□□ 1.04
SYNGAP1-206ENST00000479510 RBM24Q9BX46 236 aaKnown RBP21.53■■□□□ 1.04
SYNGAP1-206ENST00000479510 PLEKHJ1Q9NW61 149 aa21.53■■□□□ 1.04
SYNGAP1-206ENST00000479510 PLEK2Q9NYT0 353 aa21.53■■□□□ 1.04
SYNGAP1-206ENST00000479510 DKKL1Q9UK85 242 aa21.53■■□□□ 1.04
SYNGAP1-206ENST00000479510 CCDC85CA6NKD9 419 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 COX6A1P12074 109 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 RAB35Q15286 201 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 SGPP2Q8IWX5 399 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 PUSL1Q8N0Z8 303 aaKnown RBP21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 SEMA6DQ8NFY4 1073 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 SEC11CQ9BY50 192 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 METTL9Q9H1A3 318 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 PROK2Q9HC23 129 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 ZNF705EA8MWA4 302 aaPredicted RBP21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 SERPINA5P05154 406 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 KLK3P07288 261 aaPredicted RBP21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 CRYGSP22914 178 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 PTGER4P35408 488 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 ZIC4Q8N9L1 334 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 SGK3Q96BR1 496 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 CNTNAP3Q9BZ76 1288 aa21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 AKIRIN1Q9H9L7 192 aaPredicted RBP21.52■■□□□ 1.04
SYNGAP1-206ENST00000479510 PMS2P1A4D2B8 440 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 SIGLEC5O15389 551 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 YKT6O15498 198 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 GAPDHP04406 335 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 CCL3P10147 92 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 ADCYAP1P18509 176 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 DTYMKP23919 212 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 SIGLEC14Q08ET2 396 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 RBM39Q14498 530 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 MST1LQ2TV78 715 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 SPAG16Q8N0X2 631 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 LRRC18Q8N456 261 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 BOLLQ8N9W6 283 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 PIGTQ969N2 578 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 ELL3Q9HB65 397 aaPredicted RBP21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 ZNF701Q9NV72 531 aaPredicted RBP21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 PRR13Q9NZ81 148 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 TUBD1Q9UJT1 453 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 MCTS1Q9ULC4 181 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 UMODP07911 640 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 RPUSD3Q6P087 351 aaKnown RBP21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 OR51F2Q8NH61 342 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 GNRHR2Q96P88 292 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 UCN2Q96RP3 112 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 ANXA10Q9UJ72 324 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 ZNF391Q9UJN7 358 aa21.51■■□□□ 1.03
SYNGAP1-206ENST00000479510 CACNA1EQ15878 2313 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 CRYM-AS1A6NIL9 109 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 GPR31O00270 319 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 NDUFA2O43678 99 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 CBR3O75828 277 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 SNAPINO95295 136 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 HOXB5P09067 269 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 MTCP1P56278 107 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 CNN3Q15417 329 aaKnown RBP21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 ASCL4Q6XD76 172 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 GALNTL5Q7Z4T8 443 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 GPR137CQ8N3F9 429 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 BHLHE23Q8NDY6 225 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 OR4A4PQ8NGN8 299 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 FNDC9Q8TBE3 224 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 MAFIPQ8WZ33 124 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 FBXO17Q96EF6 278 aa21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 ZNF2Q9BSG1 426 aaPredicted RBP21.5■■□□□ 1.03
SYNGAP1-206ENST00000479510 C9J4A7 227 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 F8W036 122 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 CST4P01036 141 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 IFNA21P01568 189 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 CST2P09228 141 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 HKR1P10072 659 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 ARHGDIBP52566 201 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 BLOC1S1P78537 153 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 DHRS7BQ6IAN0 325 aaPredicted RBP21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 C6orf201Q7Z4U5 140 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 DTX1Q86Y01 620 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 GSKIPQ9P0R6 139 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 NCOA6Q14686 2063 aaPredicted RBP21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 KNG1P01042 644 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 CELA2AP08217 269 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 TMEM225BP0DP42 221 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 ZNF708P17019 499 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 S100A10P60903 97 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 TRA2AQ13595 282 aaKnown RBP eCLIP21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 SMCO1Q147U7 214 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 IAH1Q2TAA2 248 aaPredicted RBP21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 LDLRAD3Q86YD5 345 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 CYYR1Q96J86 154 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 UQCC1Q9NVA1 299 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 PRELID3BQ9Y3B1 194 aa21.49■■□□□ 1.03
SYNGAP1-206ENST00000479510 IGHV3-15A0A0B4J1V0 119 aa21.48■■□□□ 1.03
SYNGAP1-206ENST00000479510 SGCEO43556 437 aa21.48■■□□□ 1.03
SYNGAP1-206ENST00000479510 SFTPBP07988 381 aa21.48■■□□□ 1.03
SYNGAP1-206ENST00000479510 CAV2P51636 162 aa21.48■■□□□ 1.03
SYNGAP1-206ENST00000479510 HLA-BQ31612 363 aa21.48■■□□□ 1.03
SYNGAP1-206ENST00000479510 TAF9BQ9HBM6 251 aa21.48■■□□□ 1.03
SYNGAP1-206ENST00000479510 PTRH2Q9Y3E5 179 aaKnown RBP21.48■■□□□ 1.03
SYNGAP1-206ENST00000479510 POMT1Q9Y6A1 747 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms