RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ERVK-18Q9QC07 812 aa12.93□□□□□ -0.34
C9orf3-217ENST00000479161 PSORS1C1Q9UIG5 152 aa12.93□□□□□ -0.34
C9orf3-217ENST00000479161 hCG_1807616A0A1W2PRN6 198 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 PQLC2LA1A4F0 135 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 KIAA1324LA8MWY0 1029 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-217ENST00000479161 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-217ENST00000479161 GPR37O15354 613 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 PPIAL4GP0DN37 164 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
C9orf3-217ENST00000479161 GPM6AP51674 278 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 ST3GAL4Q11206 333 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 PLCXD3Q63HM9 321 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 RPL22L1Q6P5R6 122 aaKnown RBP12.92□□□□□ -0.34
C9orf3-217ENST00000479161 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 MOB3CQ70IA8 216 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 FAM90A1Q86YD7 464 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 OR8B3Q8NGG8 313 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 LRRC29Q8WV35 223 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 AQP3Q92482 292 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 GGHQ92820 318 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 OR8B2Q96RD0 313 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 SSBP3Q9BWW4 388 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-217ENST00000479161 ANKRD60Q9BZ19 345 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 PKIBQ9C010 78 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 CHCHD3Q9NX63 227 aaKnown RBP12.92□□□□□ -0.34
C9orf3-217ENST00000479161 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
C9orf3-217ENST00000479161 OGG1O15527 345 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 MT-ND2P03891 347 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 MYF6P23409 242 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 ZFP36P26651 326 aaKnown RBP12.91□□□□□ -0.34
C9orf3-217ENST00000479161 ETV1P50549 477 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 FUT6P51993 359 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 AQP4P55087 323 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 PAX2Q02962 417 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 CEP78Q5JTW2 689 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 FAM201AQ5SY85 155 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 KCTD8Q6ZWB6 473 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 ZNF485Q8NCK3 441 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 RPL3LQ92901 407 aaKnown RBP12.91□□□□□ -0.34
C9orf3-217ENST00000479161 DACT3Q96B18 629 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-217ENST00000479161 COMMD4Q9H0A8 199 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 BABAM2Q9NXR7 383 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 POLDIP2Q9Y2S7 368 aa12.91□□□□□ -0.34
C9orf3-217ENST00000479161 J3QT63 122 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 ZFPL1O95159 310 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 ATP6V1G2O95670 118 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-217ENST00000479161 LIPFP07098 398 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 PITPNBP48739 271 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 GNB2P62879 340 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 IL24Q13007 206 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 CNN3Q15417 329 aaKnown RBP12.9□□□□□ -0.34
C9orf3-217ENST00000479161 UBE2V2Q15819 145 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 C6orf141Q5SZD1 244 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 DCAF12L2Q5VW00 463 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 CD276Q5ZPR3 534 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 WDR25Q64LD2 544 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-217ENST00000479161 RDH10Q8IZV5 341 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 PARP16Q8N5Y8 322 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 ZNF676Q8N7Q3 588 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 OR5AK2Q8NH90 309 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 SPSB1Q96BD6 273 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 SEBOXQ9HB31 216 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-217ENST00000479161 NEK6Q9HC98 313 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 CLN8Q9UBY8 286 aa12.9□□□□□ -0.34
C9orf3-217ENST00000479161 ATRQ13535 2644 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 TRBV2A0A0J9YWF9 115 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 E9PI62 339 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 ZNF205O95201 554 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 IFNA2P01563 188 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 CD1AP06126 327 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 PGA5P0DJD9 388 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 EGR1P18146 543 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 PRKACBP22694 351 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 TAS2R43P59537 309 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 HNRNPA0Q13151 305 aaKnown RBP12.89□□□□□ -0.35
C9orf3-217ENST00000479161 SCGB2A2Q13296 93 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 CDK5R1Q15078 307 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 ODF4Q2M2E3 257 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 STUMQ69YW2 141 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 SLC36A1Q7Z2H8 476 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 TMPRSS13Q9BYE2 586 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 METTL17Q9H7H0 456 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-217ENST00000479161 GPR173Q9NS66 373 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 SCN3BQ9NY72 215 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 OR5V1Q9UGF6 321 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 PCDHGB5Q9Y5G0 923 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 INSIG2Q9Y5U4 225 aa12.89□□□□□ -0.35
C9orf3-217ENST00000479161 KIR2DS1A0A191URI9 304 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 TRAPPC2LH3BP13 241 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 SRD5A1P18405 259 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 CD80P33681 288 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 RBMXP38159 391 aaKnown RBP12.88□□□□□ -0.35
C9orf3-217ENST00000479161 HAAOP46952 286 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 RBP2P50120 134 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
C9orf3-217ENST00000479161 SEC61A1P61619 476 aaKnown RBP12.88□□□□□ -0.35
C9orf3-217ENST00000479161 LCN2P80188 198 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms