RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 TMEM212A6NML5 194 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 B4DSR2 109 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 AKR7A2O43488 359 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 GATBO75879 557 aaKnown RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 ZFPL1O95159 310 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 PLATP00750 562 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 MSMBP08118 114 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 CCDC159P0C7I6 412 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 OCM2P0CE71 109 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 OCMP0CE72 109 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF12P17014 697 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 HAAOP46952 286 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 MRPL28Q13084 256 aaKnown RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 CDK5R1Q15078 307 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF404Q494X3 552 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 TMEM155Q4W5P6 130 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 TMEM42Q69YG0 159 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 HAGHLQ6PII5 290 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 IL17RELQ6ZVW7 336 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 C11orf53Q8IXP5 236 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 BATF2Q8N1L9 274 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 GCSAMQ8N6F7 178 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 OR51F2Q8NH61 342 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 SGCDQ92629 289 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 FGGYQ96C11 551 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 SEH1LQ96EE3 360 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 ADAT3Q96EY9 351 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF184Q99676 751 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 TMEM246Q9BRR3 403 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 CHST5Q9GZS9 411 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 TMEM165Q9HC07 324 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 TRIM36Q9NQ86 728 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 PLCXD1Q9NUJ7 323 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 DNAJB11Q9UBS4 358 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 RAB26Q9ULW5 256 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 SLC7A11Q9UPY5 501 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 PCDHGB5Q9Y5G0 923 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 PHF1O43189 567 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-215ENST00000478531 RHBDL1O75783 438 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 INMTO95050 263 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 LALBAP00709 142 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 SERPINA3P01011 423 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 GYPAP02724 150 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 ISG15P05161 165 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 CDK1P06493 297 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 SOX2P48431 317 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 TGM4P49221 684 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 UBE2V2Q15819 145 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 ESCO2Q56NI9 601 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 RPL22L1Q6P5R6 122 aaKnown RBP5.77□□□□□ -1.49
BRCA1-215ENST00000478531 GLCCI1Q86VQ1 547 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 FAM90A1Q86YD7 464 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 OR5A2Q8NGI9 324 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 OR52N1Q8NH53 320 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 HAVCR2Q8TDQ0 301 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 PP6455Q8WZ26 134 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 MYDGFQ969H8 173 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 CCDC90BQ9GZT6 254 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 TLNRD1Q9H1K6 362 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 WDR13Q9H1Z4 485 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 OR51I2Q9H344 312 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 PATZ1Q9HBE1 687 aaKnown RBP5.77□□□□□ -1.49
BRCA1-215ENST00000478531 SNTG1Q9NSN8 517 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 FKBP14Q9NWM8 211 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 PAK1IP1Q9NWT1 392 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-215ENST00000478531 HIF1ANQ9NWT6 349 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 DHDHQ9UQ10 334 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 ERGIC3Q9Y282 383 aa5.77□□□□□ -1.49
BRCA1-215ENST00000478531 SIRT4Q9Y6E7 314 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-215ENST00000478531 TRAV38-1A0A0B4J264 116 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 PQLC2LA1A4F0 135 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 LGALS8O00214 317 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 ADAM20O43506 726 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 PLPP2O43688 288 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 SYNGR1O43759 233 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 TFF1P04155 84 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 EEF1B2P24534 225 aaKnown RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 WNT4P56705 351 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 CNN3Q15417 329 aaKnown RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 KCNJ8Q15842 424 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 MICBQ29980 383 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 CCDC58Q4VC31 144 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 LYPD2Q6UXB3 125 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 DCDC5Q6ZRR9 648 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 Q6ZSR3 168 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 NLRC3Q7RTR2 1065 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 ANGPTL5Q86XS5 388 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 CCDC54Q8NEL0 328 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 OR5T2Q8NGG2 359 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 OR8B3Q8NGG8 313 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 OR13C5Q8NGS8 318 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 OR13C9Q8NGT0 318 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 AQP3Q92482 292 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 RGP1Q92546 391 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-215ENST00000478531 TMEM186Q96B77 213 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 SMIM19Q96E16 107 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 BORCS8Q96FH0 119 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF488Q96MN9 340 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 TECTBQ96PL2 329 aa5.76□□□□□ -1.49
BRCA1-215ENST00000478531 SPACA5Q96QH8 159 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms