RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 DMWDQ09019 674 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 ALKBH6Q3KRA9 238 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 SPANXN5Q5MJ07 72 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 GLDNQ6ZMI3 551 aaPredicted RBP12.6□□□□□ -0.39
NPHP4-208ENST00000478423 FAM185AQ8N0U4 392 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 SLC35G3Q8N808 338 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 YIPF5Q969M3 257 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 SERTAD4Q9NUC0 356 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 IL5P05113 134 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 CELA2AP08217 269 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 LIFP15018 202 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 CD96P40200 585 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 ZNF83P51522 516 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 BRICD5Q6PL45 260 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 OR2G3Q8NGZ4 309 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 SAP25Q8TEE9 199 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 SFT2D1Q8WV19 159 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 MARC2Q969Z3 335 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 SSX3Q99909 188 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 FAAP24Q9BTP7 215 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 TMEM74BQ9NUR3 256 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 C17orf112F2Z3M2 114 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 JTBO76095 146 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 IL3RAP26951 378 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 RPL12P30050 165 aaKnown RBP12.6□□□□□ -0.39
NPHP4-208ENST00000478423 LIMS1P48059 325 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 CDH26Q8IXH8 852 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 ADAT1Q9BUB4 502 aaKnown RBP12.6□□□□□ -0.39
NPHP4-208ENST00000478423 MAGT1Q9H0U3 335 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 MIXL1Q9H2W2 232 aa12.6□□□□□ -0.39
NPHP4-208ENST00000478423 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 PRDX4Q13162 271 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 INPP5JQ15735 1006 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-208ENST00000478423 SP6Q3SY56 376 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 TUSC5Q8IXB3 177 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 RELL2Q8NC24 303 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-208ENST00000478423 SLC26A10Q8NG04 563 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 C2orf50Q96LR7 162 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 MARVELD1Q9BSK0 173 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 A8MXE2 369 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 B4E171 279 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 TSPAN2O60636 221 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 ZNF354AO60765 605 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-208ENST00000478423 CHRNB4P30926 498 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 TSPAN7P41732 249 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 UBE2KP61086 200 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 S100A12P80511 92 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 HES1Q14469 280 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 TESK1Q15569 626 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 CTHRC1Q96CG8 243 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 CHST6Q9GZX3 395 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 A0A1W2PQM1 296 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 SPRY3O43610 288 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 APOA2P02652 100 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 SEMG1P04279 462 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 GP1BAP07359 652 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 RBMS3Q6XE24 437 aaKnown RBP12.59□□□□□ -0.39
NPHP4-208ENST00000478423 NLRC3Q7RTR2 1065 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 TCTE3Q8IZS6 198 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 MALSU1Q96EH3 234 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 TIMD4Q96H15 378 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 PSME4Q14997 1843 aa12.59□□□□□ -0.39
NPHP4-208ENST00000478423 MEX3AA1L020 520 aaKnown RBP12.58□□□□□ -0.39
NPHP4-208ENST00000478423 RPL35P42766 123 aaKnown RBP12.58□□□□□ -0.39
NPHP4-208ENST00000478423 PLA1AQ53H76 456 aa12.58□□□□□ -0.39
NPHP4-208ENST00000478423 PLPPR2Q96GM1 343 aa12.58□□□□□ -0.39
NPHP4-208ENST00000478423 ZNF71Q9NQZ8 489 aaPredicted RBP12.58□□□□□ -0.39
NPHP4-208ENST00000478423 SIRT4Q9Y6E7 314 aaPredicted RBP12.58□□□□□ -0.39
NPHP4-208ENST00000478423 COL6A6A6NMZ7 2263 aa12.58□□□□□ -0.39
NPHP4-208ENST00000478423 MMP16P51512 607 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 ESPL1Q14674 2120 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 ST3GAL2Q16842 350 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 OR2Z1Q8NG97 314 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 ASB5Q8WWX0 329 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 FBXO17Q96EF6 278 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 ZNF385AQ96PM9 386 aaKnown RBP12.58□□□□□ -0.4
NPHP4-208ENST00000478423 PILRBQ9UKJ0 227 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 DOCK8Q8NF50 2099 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 NGFRP08138 427 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 ASAH2BP0C7U1 165 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 MLF1P58340 268 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 DHRS2Q13268 280 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 PLPPR5Q32ZL2 321 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 GVQW1Q8N7I0 195 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 RNF133Q8WVZ7 376 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 S1PR3Q99500 378 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 SSSCA1O60232 199 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 RAG2P55895 527 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 EXOSC2Q13868 293 aaKnown RBP12.58□□□□□ -0.4
NPHP4-208ENST00000478423 EDARADDQ8WWZ3 215 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 DLL4Q9NR61 685 aa12.58□□□□□ -0.4
NPHP4-208ENST00000478423 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
NPHP4-208ENST00000478423 RLFQ13129 1914 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 E5RGE8 158 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 DCTN6O00399 190 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 EFEMP2O95967 443 aa12.57□□□□□ -0.4
NPHP4-208ENST00000478423 CISD2Q8N5K1 135 aaKnown RBP12.57□□□□□ -0.4
NPHP4-208ENST00000478423 FBXW5Q969U6 566 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms