RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 FKBP14Q9NWM8 211 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 PAK1IP1Q9NWT1 392 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-222ENST00000478095 BABAM2Q9NXR7 383 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 KCNS2Q9ULS6 477 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 HHLA2Q9UM44 414 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 SIRT4Q9Y6E7 314 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-222ENST00000478095 MED13LQ71F56 2210 aa8.6□□□□□ -1.03
HDAC6-222ENST00000478095 ZANQ9Y493 2812 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 PQLC2LA1A4F0 135 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 OOEPA6NGQ2 149 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 OR5B21A6NL26 309 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 TMEM212A6NML5 194 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 LGALS8O00214 317 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 AKR7A2O43488 359 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 PLPP2O43688 288 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 GYPAP02724 150 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 ISG15P05161 165 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 CDK1P06493 297 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 CCDC159P0C7I6 412 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF12P17014 697 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 ZFP36P26651 326 aaKnown RBP8.59□□□□□ -1.03
HDAC6-222ENST00000478095 HAAOP46952 286 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 TGM4P49221 684 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 UBE2V2Q15819 145 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 FAM76BQ5HYJ3 339 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 IL17RELQ6ZVW7 336 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 BATF2Q8N1L9 274 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF485Q8NCK3 441 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 CCDC54Q8NEL0 328 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 OR52N1Q8NH53 320 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 OR51F2Q8NH61 342 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 TSEN15Q8WW01 171 aaKnown RBP8.59□□□□□ -1.03
HDAC6-222ENST00000478095 RGP1Q92546 391 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-222ENST00000478095 ITFG2Q969R8 447 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 ZNF488Q96MN9 340 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 CHST5Q9GZS9 411 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 WDR13Q9H1Z4 485 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 OR51I2Q9H344 312 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 TRIM36Q9NQ86 728 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 SNTG1Q9NSN8 517 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 HIF1ANQ9NWT6 349 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 SCN3BQ9NY72 215 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 RAB26Q9ULW5 256 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 CR1P17927 2039 aa8.59□□□□□ -1.03
HDAC6-222ENST00000478095 SRRM5B3KS81 715 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 F5H0A9 414 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-222ENST00000478095 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-222ENST00000478095 PHF1O43189 567 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-222ENST00000478095 SYNGR1O43759 233 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 RRP9O43818 475 aaKnown RBP8.58□□□□□ -1.04
HDAC6-222ENST00000478095 GATBO75879 557 aaKnown RBP8.58□□□□□ -1.04
HDAC6-222ENST00000478095 INMTO95050 263 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 PLATP00750 562 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 LHBP01229 141 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 TFF1P04155 84 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 SOX2P48431 317 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 RPL22L1Q6P5R6 122 aaKnown RBP8.58□□□□□ -1.04
HDAC6-222ENST00000478095 DCDC5Q6ZRR9 648 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 GLCCI1Q86VQ1 547 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 ANGPTL5Q86XS5 388 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 FAM90A1Q86YD7 464 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 EGFL6Q8IUX8 553 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 OR5T2Q8NGG2 359 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 OR13C5Q8NGS8 318 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 OR13C9Q8NGT0 318 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 HAVCR2Q8TDQ0 301 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 PP6455Q8WZ26 134 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 AQP3Q92482 292 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 TMEM186Q96B77 213 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 SMIM19Q96E16 107 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 ZNF184Q99676 751 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-222ENST00000478095 DNAJB11Q9UBS4 358 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 SLC7A11Q9UPY5 501 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 DHDHQ9UQ10 334 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 ERGIC3Q9Y282 383 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 TPRKBQ9Y3C4 175 aa8.58□□□□□ -1.04
HDAC6-222ENST00000478095 IGKV1-27A0A075B6S5 117 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 TRAV38-1A0A0B4J264 116 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 IGKV1-9A0A0C4DH69 117 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 A0A1B0GW55 424 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 J3QT63 122 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 ADAM20O43506 726 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 SERPINA3P01011 423 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 MT-ND2P03891 347 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 WNT2P09544 360 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 OCM2P0CE71 109 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 OCMP0CE72 109 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-222ENST00000478095 DUX4L2P0CJ85 424 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 DUX4L3P0CJ86 424 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 DUX4L4P0CJ87 422 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 DUX4L5P0CJ88 424 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 DUX4L6P0CJ89 424 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 DUX4L7P0CJ90 424 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 ATF1P18846 271 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 CRHBPP24387 322 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 AZGP1P25311 298 aaKnown RBP8.57□□□□□ -1.04
HDAC6-222ENST00000478095 CFHR2P36980 270 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 PITPNBP48739 271 aa8.57□□□□□ -1.04
HDAC6-222ENST00000478095 DVL1P1P54792 670 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-222ENST00000478095 WNT4P56705 351 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms