RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 TRIM36Q9NQ86 728 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 TMEM38BQ9NVV0 291 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 CLN8Q9UBY8 286 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 CGGBP1Q9UFW8 167 aaPredicted RBP8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 MIOXQ9UGB7 285 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 CLEC2DQ9UHP7 191 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 COPS3Q9UNS2 423 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 KLHDC2Q9Y2U9 406 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 LSM2Q9Y333 95 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 CAB39Q9Y376 341 aaPredicted RBP8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 TMEM178BH3BS89 294 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF593O00488 134 aaPredicted RBP8□□□□□ -1.13
SMARCB1-206ENST00000477836 NOL3O60936 208 aaKnown RBP8□□□□□ -1.13
SMARCB1-206ENST00000477836 FARS2O95363 451 aaKnown RBP8□□□□□ -1.13
SMARCB1-206ENST00000477836 KRT8P05787 483 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 VSIG10L2P0DP72 767 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 PSKH1P11801 424 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 TNFSF4P23510 183 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 CPT2P23786 658 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 APLNRP35414 380 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 RPS27P42677 84 aaKnown RBP8□□□□□ -1.13
SMARCB1-206ENST00000477836 PITPNBP48739 271 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 EFNB2P52799 333 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 HCCSP53701 268 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 KRTAP10-11P60412 298 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 PLP2Q04941 152 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 MLLT11Q13015 90 aaPredicted RBP8□□□□□ -1.13
SMARCB1-206ENST00000477836 AQP6Q13520 282 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 EIF2B1Q14232 305 aaKnown RBP8□□□□□ -1.13
SMARCB1-206ENST00000477836 KCNMB1Q16558 191 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 SGCAQ16586 387 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 PCK2Q16822 640 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 CDONQ4KMG0 1287 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 TEX30Q5JUR7 227 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 SYT6Q5T7P8 510 aaPredicted RBP8□□□□□ -1.13
SMARCB1-206ENST00000477836 MBNL2Q5VZF2 373 aaKnown RBP8□□□□□ -1.13
SMARCB1-206ENST00000477836 NLRC3Q7RTR2 1065 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 SSX6Q7RTT6 188 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 SATL1Q86VE3 508 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 LINC00346Q8IVM7 164 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 PDZD9Q8IXQ8 264 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF101Q8IZC7 436 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 SYS1Q8N2H4 156 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 OR2Z1Q8NG97 314 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 OR13F1Q8NGS4 319 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 OR2AJ1Q8NGZ0 328 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 SPRYD4Q8WW59 207 aaPredicted RBP8□□□□□ -1.13
SMARCB1-206ENST00000477836 ITLN1Q8WWA0 313 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 C4orf36Q96KX1 117 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 COG8Q96MW5 612 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 OR5M11Q96RB7 305 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 MGLLQ99685 303 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 PPA2Q9H2U2 334 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 CNTD2Q9H8S5 307 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 GNG8Q9UK08 70 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 IKZF2Q9UKS7 526 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 FAM96BQ9Y3D0 163 aa8□□□□□ -1.13
SMARCB1-206ENST00000477836 SMIM31A0A1B0GVY4 71 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF879B4DU55 563 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 C22orf46C9J442 243 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 RNASEK-C17orf49H0YIS7 233 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 J3QLW9 94 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 ENSAO43768 121 aaKnown RBP7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 TIMM8AO60220 97 aaPredicted RBP7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 NHLRC4P0CG21 123 aaPredicted RBP7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 MMP9P14780 707 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF19P17023 458 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 ALOX5APP20292 161 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 TAS2R43P59537 309 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 LSM6P62312 80 aaKnown RBP7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 BDH1Q02338 343 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 SLC36A2Q495M3 483 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 TP53I3Q53FA7 332 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 KCTD18Q6PI47 426 aaPredicted RBP7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 C11orf88Q6PI97 169 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 PLEKHG7Q6ZR37 379 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 SLC16A14Q7RTX9 510 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 DCXRQ7Z4W1 244 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 MUC7Q8TAX7 377 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 HAVCR2Q8TDQ0 301 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 THEM6Q8WUY1 208 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 UFD1Q92890 307 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 NABP1Q96AH0 204 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 OPALINQ96PE5 141 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 OR8B4Q96RC9 309 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 TMEM246Q9BRR3 403 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF649Q9BS31 505 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 ABHD6Q9BV23 337 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 ISG20L2Q9H9L3 353 aaKnown RBP7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 SIAEQ9HAT2 523 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 EIF3KQ9UBQ5 218 aaKnown RBP7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 CYB5R1Q9UHQ9 305 aa7.99□□□□□ -1.13
SMARCB1-206ENST00000477836 DPPA5A6NC42 116 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 CCDC160A6NGH7 325 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 METTL15A6NJ78 407 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 PRR32B1ATL7 298 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF878C9JN71 531 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 FBXO24O75426 580 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 SULT1C4O75897 302 aa7.98□□□□□ -1.13
SMARCB1-206ENST00000477836 CYB5R3P00387 301 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms