RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 Q6ZSR3 168 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 SLC36A1Q7Z2H8 476 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 KCTD20Q7Z5Y7 419 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 OR5T2Q8NGG2 359 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 ZNF671Q8TAW3 534 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 C22orf15Q8WYQ4 148 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 GCDHQ92947 438 aaPredicted RBP11.73□□□□□ -0.53
PDE6D-204ENST00000477748 DACT3Q96B18 629 aaPredicted RBP11.73□□□□□ -0.53
PDE6D-204ENST00000477748 C12orf43Q96C57 262 aaKnown RBP11.73□□□□□ -0.53
PDE6D-204ENST00000477748 LGALS12Q96DT0 336 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 WDR13Q9H1Z4 485 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 PLEKHA1Q9HB21 404 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 SMURF1Q9HCE7 757 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 AMBNQ9NP70 447 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 SNTG1Q9NSN8 517 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 KAAG1Q9UBP8 84 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 NUP50Q9UKX7 468 aa11.73□□□□□ -0.53
PDE6D-204ENST00000477748 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 DLGAP1O14490 977 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 GLRA1P23415 457 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 CFPP27918 469 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 OR12D2P58182 307 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 KLF17Q5JT82 389 aaPredicted RBP11.72□□□□□ -0.53
PDE6D-204ENST00000477748 RBMS3Q6XE24 437 aaKnown RBP11.72□□□□□ -0.53
PDE6D-204ENST00000477748 PRSS35Q8N3Z0 413 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 CCDC54Q8NEL0 328 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 ST8SIA4Q92187 359 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 AQP3Q92482 292 aa11.72□□□□□ -0.53
PDE6D-204ENST00000477748 MRPL48Q96GC5 212 aaKnown RBP11.72□□□□□ -0.53
PDE6D-204ENST00000477748 ZMAT3Q9HA38 289 aaKnown RBP11.72□□□□□ -0.53
PDE6D-204ENST00000477748 A0A1B0GW55 424 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 ANKRD61A6NGH8 418 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 NKX6-3A6NJ46 265 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 J3QLW9 94 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 NDUFB3O43676 98 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 FADS2O95864 444 aaKnown RBP11.71□□□□□ -0.53
PDE6D-204ENST00000477748 LIPFP07098 398 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 HTR1AP08908 422 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 UBCP0CG48 685 aaKnown RBP11.71□□□□□ -0.53
PDE6D-204ENST00000477748 DUX4L2P0CJ85 424 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 DUX4L3P0CJ86 424 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 DUX4L4P0CJ87 422 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 DUX4L5P0CJ88 424 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 DUX4L6P0CJ89 424 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 DUX4L7P0CJ90 424 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 PPIAL4GP0DN37 164 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 ZNF19P17023 458 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 KIR3DL2P43630 455 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 FGF12P61328 243 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 ACTA2P62736 377 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 ACTG2P63267 376 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 STUMQ69YW2 141 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 DUX4L9Q6RFH8 374 aaPredicted RBP11.71□□□□□ -0.53
PDE6D-204ENST00000477748 BTN2A1Q7KYR7 527 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 LHFPL3Q86UP9 236 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 RDH10Q8IZV5 341 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 PNLDC1Q8NA58 520 aaKnown RBP11.71□□□□□ -0.53
PDE6D-204ENST00000477748 OR2G2Q8NGZ5 317 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 TMIGD2Q96BF3 282 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 UPRTQ96BW1 309 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 MYCBPQ99417 103 aaPredicted RBP11.71□□□□□ -0.53
PDE6D-204ENST00000477748 ALG8Q9BVK2 526 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 C8orf4Q9NR00 106 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 NLKQ9UBE8 527 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 DUX4Q9UBX2 424 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 ZNF69Q9UC07 566 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 MYRFQ9Y2G1 1151 aa11.71□□□□□ -0.53
PDE6D-204ENST00000477748 RPL36Q9Y3U8 105 aaKnown RBP11.71□□□□□ -0.53
PDE6D-204ENST00000477748 IGHV3OR16-10A0A075B7F0 116 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 TRAV40A0A0B4J280 105 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 LOC107986453A0A1B0GWG9 222 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 PQLC2LA1A4F0 135 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 J3QT63 122 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 FCN3O75636 299 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 ECDO95905 644 aaPredicted RBP11.7□□□□□ -0.54
PDE6D-204ENST00000477748 IGHV4-38-2P0DP08 117 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 AMY2BP19961 511 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 PEX2P28328 305 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 HAAOP46952 286 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 GABRA2P47869 451 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 TGM4P49221 684 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 UBA52P62987 128 aaKnown RBP11.7□□□□□ -0.54
PDE6D-204ENST00000477748 RAB40BQ12829 278 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 IKZF1Q13422 519 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 GALEQ14376 348 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 TUSC1Q2TAM9 212 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 C11orf91Q3C1V1 193 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 LRRC10Q5BKY1 277 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 ATPAF1Q5TC12 328 aaPredicted RBP11.7□□□□□ -0.54
PDE6D-204ENST00000477748 TMEM244Q5VVB8 128 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 FDX2Q6P4F2 183 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 FGFRL1Q8N441 504 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 PACRGLQ8N7B6 248 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 C3orf56Q8N813 242 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 ZDHHC22Q8N966 263 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 ANGPTL6Q8NI99 470 aa11.7□□□□□ -0.54
PDE6D-204ENST00000477748 TRMT10AQ8TBZ6 339 aaKnown RBP11.7□□□□□ -0.54
PDE6D-204ENST00000477748 APH1BQ8WW43 257 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms