RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 EXD3Q8N9H8 876 aa8.62□□□□□ -1.03
CMC1-209ENST00000477739 PIGMQ9H3S5 423 aa8.62□□□□□ -1.03
CMC1-209ENST00000477739 DKKL1Q9UK85 242 aa8.62□□□□□ -1.03
CMC1-209ENST00000477739 PADI1Q9ULC6 663 aa8.62□□□□□ -1.03
CMC1-209ENST00000477739 NPTNQ9Y639 398 aa8.62□□□□□ -1.03
CMC1-209ENST00000477739 SHISA7A6NL88 538 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 RPL12P30050 165 aaKnown RBP8.61□□□□□ -1.03
CMC1-209ENST00000477739 CSNK1A1P48729 337 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 PIGPP57054 158 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 SMAD4Q13485 552 aaKnown RBP8.61□□□□□ -1.03
CMC1-209ENST00000477739 KISS1Q15726 138 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 LRRC75AQ8NAA5 344 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 SHDQ96IW2 340 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 ULBP2Q9BZM5 246 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 UQCC1Q9NVA1 299 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 IGKV1D-8A0A087WSZ0 117 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 C1orf196B1AJZ1 125 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 MS4A18H0YCH9 400 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 ADCYAP1P18509 176 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 GALNSP34059 522 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 MS4A18Q3C1V0 323 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 PIGYQ3MUY2 71 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 C9orf152Q5JTZ5 239 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 ZNF684Q5T5D7 378 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 AVPI1Q5T686 147 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 GPR157Q5UAW9 335 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 FNDC7Q5VTL7 733 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 ZNF565Q8N9K5 539 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 OR51H1Q8NH63 302 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 ZNF385AQ96PM9 386 aaKnown RBP8.61□□□□□ -1.03
CMC1-209ENST00000477739 SLC5A7Q9GZV3 580 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 ADAM19Q9H013 955 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 SH3BGRL3Q9H299 93 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 C5orf66Q9H5L9 145 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 UCK1Q9HA47 277 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 C12orf10Q9HB07 376 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 BIN3Q9NQY0 253 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 RARRES3Q9UL19 164 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 PTRH2Q9Y3E5 179 aaKnown RBP8.61□□□□□ -1.03
CMC1-209ENST00000477739 EML5Q05BV3 1969 aa8.61□□□□□ -1.03
CMC1-209ENST00000477739 RAB19A4D1S5 217 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 SNAPINO95295 136 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 ZBTB25P24278 435 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 CXCL12P48061 93 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 NHLH2Q02577 135 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 DMWDQ09019 674 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 C17orf67Q0P5P2 114 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 ZNF674Q2M3X9 581 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 HSD17B13Q7Z5P4 300 aaPredicted RBP8.6□□□□□ -1.03
CMC1-209ENST00000477739 GPR137CQ8N3F9 429 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 SLC25A45Q8N413 288 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 CADM4Q8NFZ8 388 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 ZNF285Q96NJ3 590 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 USB1Q9BQ65 265 aaKnown RBP8.6□□□□□ -1.03
CMC1-209ENST00000477739 SRPK3Q9UPE1 567 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 UBE2J1Q9Y385 318 aaPredicted RBP8.6□□□□□ -1.03
CMC1-209ENST00000477739 FLVCR1Q9Y5Y0 555 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 ACACAQ13085 2346 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 RNASEK-C17orf49H0YIS7 233 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 H7C1Q1 480 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 TSPAN2O60636 221 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 CDC14BO60729 498 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 HLA-HP01893 362 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 RAB5BP61020 215 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 HERV-K104P61576 105 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 RIPPLY1Q0D2K3 151 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 PPA1Q15181 289 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 HLA-BQ31612 363 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 GUSBP11Q6P575 273 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 SLC22A25Q6T423 547 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 LYZL2Q7Z4W2 148 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 PAQR4Q8N4S7 273 aaPredicted RBP8.6□□□□□ -1.03
CMC1-209ENST00000477739 G6PC2Q9NQR9 355 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 GPR27Q9NS67 375 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 P4HTMQ9NXG6 502 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 EMC3Q9P0I2 261 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 PRELID3BQ9Y3B1 194 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 WIPF3A6NGB9 483 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 HSD17B6O14756 317 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 TNFSF11O14788 317 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 TLX3O43711 291 aaPredicted RBP8.6□□□□□ -1.03
CMC1-209ENST00000477739 PTGFRP43088 359 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 NDUFA6P56556 154 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 TMEM33P57088 247 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 CFHR1Q03591 330 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 FABP9Q0Z7S8 132 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 LTC4SQ16873 150 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 ZNF260Q3ZCT1 412 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 MOB3CQ70IA8 216 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 OR5AS1Q8N127 324 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 D2HGDHQ8N465 521 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 NECAP1Q8NC96 275 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 OR14L1PQ8NHC6 308 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 KCNG3Q8TAE7 436 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 S100PBPQ96BU1 408 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 PIK3IP1Q96FE7 263 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 TWSG1Q9GZX9 223 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 SLC7A11Q9UPY5 501 aa8.6□□□□□ -1.03
CMC1-209ENST00000477739 ZFHX2Q9C0A1 2572 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms