RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 DCAKDQ8WVC6 231 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 ASZ1Q8WWH4 475 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 C9orf72Q96LT7 481 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 GPR82Q96P67 336 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 SCGB3A2Q96PL1 93 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 TEAD3Q99594 435 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 LINC00574Q9H8X3 128 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 PXMP2Q9NR77 195 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 MCUBQ9NWR8 336 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 MRPL22Q9NWU5 206 aaKnown RBP1.25□□□□□ -2.21
CACUL1-202ENST00000477583 ZNF257Q9Y2Q1 563 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 RICTORQ6R327 1708 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 IFT172Q9UG01 1749 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 MROH2AA6NES4 1674 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 CAMSAP1Q5T5Y3 1602 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 SLIT1O75093 1534 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 CPS1P31327 1500 aa1.25□□□□□ -2.21
CACUL1-202ENST00000477583 A2ML1A8K2U0 1454 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 NKTRP30414 1462 aaKnown RBP1.24□□□□□ -2.21
CACUL1-202ENST00000477583 ANKARQ7Z5J8 1434 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 IBTKQ9P2D0 1353 aaPredicted RBP1.24□□□□□ -2.21
CACUL1-202ENST00000477583 CLTCQ00610 1675 aaKnown RBP1.24□□□□□ -2.21
CACUL1-202ENST00000477583 SCN1AP35498 2009 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 SUPT3HB4E1H0 165 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 XRCC2O43543 280 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 CTNSO60931 367 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 HMMRO75330 724 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 MPDU1O75352 247 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 SCELO95171 688 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 TACSTD2P09758 323 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 TGFBR1P36897 503 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 GPR1P46091 355 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 IDH2P48735 452 aaKnown RBP1.24□□□□□ -2.21
CACUL1-202ENST00000477583 OR2B8PP59922 312 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 MAD2L1BPQ15013 274 aaPredicted RBP1.24□□□□□ -2.21
CACUL1-202ENST00000477583 OR1Q1Q15612 314 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 TMEM236Q5W0B7 351 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 KDM4DQ6B0I6 523 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 OR2T5Q6IEZ7 315 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 C16orf47Q6ZP98 133 aaPredicted RBP1.24□□□□□ -2.21
CACUL1-202ENST00000477583 TMEM136Q6ZRR5 245 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 TMEM104Q8NE00 496 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 C1orf64Q8NEQ6 169 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 OR2T29Q8NH02 315 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 FAM19A4Q96LR4 140 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 AGMATQ9BSE5 352 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 EMC6Q9BV81 110 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 ANGPTL4Q9BY76 406 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 NAA50Q9GZZ1 169 aaKnown RBP1.24□□□□□ -2.21
CACUL1-202ENST00000477583 PLEKHF2Q9H8W4 249 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 CD209Q9NNX6 404 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 DYRK4Q9NR20 520 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 FBXO8Q9NRD0 319 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 TAS2R5Q9NYW4 299 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 TMEM131LA2VDJ0 1609 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 ABCC6O95255 1503 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 PTPRMP28827 1452 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 IQSEC2Q5JU85 1478 aa1.24□□□□□ -2.21
CACUL1-202ENST00000477583 CDK12Q9NYV4 1490 aaPredicted RBP1.24□□□□□ -2.21
CACUL1-202ENST00000477583 DCCP43146 1447 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 CPSF1Q10570 1443 aaKnown RBP1.23□□□□□ -2.21
CACUL1-202ENST00000477583 YTHDC2Q9H6S0 1430 aaKnown RBP1.23□□□□□ -2.21
CACUL1-202ENST00000477583 NCOA3Q9Y6Q9 1424 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 KNDC1Q76NI1 1749 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 RTL1A6NKG5 1358 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 TMEM2Q9UHN6 1383 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 EVC2Q86UK5 1308 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 CCL15-CCL14A0A0B4J2E2 113 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 PRAMEF26H0Y7S4 382 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 MFNGO00587 321 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 OR7C2O60412 319 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 SCO1O75880 301 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 CATP04040 527 aaKnown RBP1.23□□□□□ -2.21
CACUL1-202ENST00000477583 THRAP10827 490 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 NELFEP18615 380 aaKnown RBP1.23□□□□□ -2.21
CACUL1-202ENST00000477583 COL8A2P25067 703 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 CD82P27701 267 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 MPV17P39210 176 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 OR1G1P47890 313 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 CLDN18P56856 261 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 ATP6V0D1P61421 351 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 RPS11P62280 158 aaKnown RBP eCLIP1.23□□□□□ -2.21
CACUL1-202ENST00000477583 FLI1Q01543 452 aaPredicted RBP1.23□□□□□ -2.21
CACUL1-202ENST00000477583 KDSRQ06136 332 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 DNAJC3Q13217 504 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 CCL15Q16663 113 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 C5orf64Q2M2E5 130 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 SP6Q3SY56 376 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 MFSD14CQ5VZR4 134 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 TBPL2Q6SJ96 375 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 ANGPTL8Q6UXH0 198 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 BRD3OSQ6XYD6 125 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 KIF2BQ8N4N8 673 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 INO80EQ8NBZ0 244 aaPredicted RBP1.23□□□□□ -2.21
CACUL1-202ENST00000477583 OR52K2Q8NGK3 314 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 RXFP2Q8WXD0 754 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 S100PBPQ96BU1 408 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 RCN3Q96D15 328 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 UBE2E2Q96LR5 201 aa1.23□□□□□ -2.21
CACUL1-202ENST00000477583 SHANK2-AS3Q9BTD1 123 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms