RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 hCG_1807616A0A1W2PRN6 198 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 LYNX1G3V0Z9 82 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 PIN1P1O15428 100 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 LYNX1P0DP58 116 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 MRPS11P82912 194 aaKnown RBP12.94□□□□□ -0.34
SEC13-215ENST00000477547 HNRNPA0Q13151 305 aaKnown RBP12.94□□□□□ -0.34
SEC13-215ENST00000477547 HSD17B12Q53GQ0 312 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 Q5PR19 223 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 CD200R1LQ6Q8B3 271 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 TMEM91Q6ZNR0 172 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 ZNF420Q8TAQ5 688 aaPredicted RBP12.94□□□□□ -0.34
SEC13-215ENST00000477547 YIPF5Q969M3 257 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 MDFIQ99750 246 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 GCM1Q9NP62 436 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 C1orf123Q9NWV4 160 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 SCOCQ9UIL1 159 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 VPS13CQ709C8 3753 aa12.94□□□□□ -0.34
SEC13-215ENST00000477547 RP2O75695 350 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 ARL6IP5O75915 188 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 CSF3P09919 207 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 UCHL1P09936 223 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 IGFBP3P17936 291 aaPredicted RBP12.93□□□□□ -0.34
SEC13-215ENST00000477547 GADD45AP24522 165 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 CRYBB2P43320 205 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 FUT6P51993 359 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 HFEQ30201 348 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 DDI2Q5TDH0 399 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 ZNF529Q6P280 563 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 HAGHLQ6PII5 290 aaPredicted RBP12.93□□□□□ -0.34
SEC13-215ENST00000477547 CLEC2AQ6UVW9 174 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 UNQ9370/PRO34162Q6UXP9 181 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 LHFPL2Q6ZUX7 228 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 DNAAF1Q8NEP3 725 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 OR11L1Q8NGX0 322 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 RPL3LQ92901 407 aaKnown RBP12.93□□□□□ -0.34
SEC13-215ENST00000477547 HPS1Q92902 700 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 SPACA5Q96QH8 159 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 SMR3AQ99954 134 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 TLNRD1Q9H1K6 362 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 TCF7L1Q9HCS4 588 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 DCAF16Q9NXF7 216 aa12.93□□□□□ -0.34
SEC13-215ENST00000477547 IGKV1-27A0A075B6S5 117 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 TRDV1A0A1B0GX56 115 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 CLDN25C9JDP6 229 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 J3QT63 122 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 MAGEB3O15480 346 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 ALX3O95076 343 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 PLATP00750 562 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 IRF2P14316 349 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 GALP22466 123 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 CALRP27797 417 aaKnown RBP12.92□□□□□ -0.34
SEC13-215ENST00000477547 BDKRB2P30411 391 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 HAAOP46952 286 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 POU3F4P49335 361 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 RBP2P50120 134 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 PDLIM4P50479 330 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 ATP1B3P54709 279 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 TIMM50Q3ZCQ8 353 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 C22orf42Q6IC83 251 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 ZNF826PQ6ZT77 177 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 ZNF573Q86YE8 665 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 SCCPDHQ8NBX0 429 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 OR13F1Q8NGS4 319 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 Q8TCH9 128 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 PHYHIPQ92561 330 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 CCL17Q92583 94 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 ERGIC1Q969X5 290 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 RFT1Q96AA3 541 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 YIPF6Q96EC8 236 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 CPNE2Q96FN4 548 aaPredicted RBP12.92□□□□□ -0.34
SEC13-215ENST00000477547 CHCHD6Q9BRQ6 235 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 SLITRK2Q9H156 845 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 OR51E2Q9H255 320 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 OR51I2Q9H344 312 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 CHODLQ9H9P2 273 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 TMEM138Q9NPI0 162 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 TMEM106BQ9NUM4 274 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 SSR3Q9UNL2 185 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 FOXJ3Q9UPW0 622 aa12.92□□□□□ -0.34
SEC13-215ENST00000477547 FLNAP21333 2647 aaKnown RBP12.92□□□□□ -0.34
SEC13-215ENST00000477547 LOC100506127A0A0U1RQW1 187 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 LRRC30A6NM36 301 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 IFNL4K9M1U5 179 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 CDIPTO14735 213 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 GPX5O75715 221 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 MAS1P04201 325 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 TFAP2AP05549 437 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 MYL9P24844 172 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 COL8A2P25067 703 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 RBMXP38159 391 aaKnown RBP12.91□□□□□ -0.34
SEC13-215ENST00000477547 ALDH3B2P48448 385 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 MTCP1P56278 107 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 FAM76BQ5HYJ3 339 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 WDR82Q6UXN9 313 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 C1orf87Q8N0U7 546 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 OR5D18Q8NGL1 313 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 LRRC29Q8WV35 223 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 FAM168AQ92567 244 aa12.91□□□□□ -0.34
SEC13-215ENST00000477547 PIMREGQ9BSJ6 248 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms