RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 LSRQ86X29 649 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-220ENST00000477528 CT55Q8WUE5 264 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 DHRS9Q9BPW9 319 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 EDEM2Q9BV94 578 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 SLC22A20A6NK97 555 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 CEBPZOSA8MTT3 80 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 MPC2O95563 127 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 ISG15P05161 165 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 AGFG1P52594 562 aaKnown RBP12.93□□□□□ -0.34
HDAC6-220ENST00000477528 SLC38A6Q8IZM9 456 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 NKX6-2Q9C056 277 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-220ENST00000477528 MT-CO3P00414 261 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 IFNA17P01571 189 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 GABRA2P47869 451 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 RAB1AP62820 205 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 SLC25A42Q86VD7 318 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 TMEM217Q8N7C4 229 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 PLA2G3Q9NZ20 509 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 HEATR5BQ9P2D3 2071 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 DFFBO76075 338 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 ZNF17P17021 662 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 GLRA1P23415 457 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 ZNF362Q5T0B9 420 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-220ENST00000477528 OR51H1Q8NH63 302 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 VOPP1Q96AW1 172 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 PECRQ9BY49 303 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 LGALS8O00214 317 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 IGHMP01871 453 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 CST2P09228 141 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 ZP3P21754 424 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 AKR1C1Q04828 323 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 RNPS1Q15287 305 aaKnown RBP12.92□□□□□ -0.34
HDAC6-220ENST00000477528 OR8G1Q15617 311 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 EXTL1Q92935 676 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 FAM131CQ96AQ9 280 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 ZNF285Q96NJ3 590 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 UCN2Q96RP3 112 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 FAAP24Q9BTP7 215 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 J3QRE1 110 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 TERTO14746 1132 aaKnown RBP12.92□□□□□ -0.34
HDAC6-220ENST00000477528 SCO1O75880 301 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 RPL35P42766 123 aaKnown RBP12.92□□□□□ -0.34
HDAC6-220ENST00000477528 OR1S2Q8NGQ3 325 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 SMOC1Q9H4F8 434 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 TCF20Q9UGU0 1960 aaKnown RBP12.92□□□□□ -0.34
HDAC6-220ENST00000477528 PATE3B3GLJ2 98 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 AADACP22760 399 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 MLF1P58340 268 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 LFNGQ8NES3 379 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 ZNRF4Q8WWF5 429 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 HAS2Q92819 552 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 MAP6Q96JE9 813 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 CA10Q9NS85 328 aa12.92□□□□□ -0.34
HDAC6-220ENST00000477528 A0A1W2PNV4 684 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 FGF5P12034 268 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 FAM122CQ6P4D5 195 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 OR56B2PQ8NGI1 322 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 OR4D10Q8NGI6 311 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 SAP25Q8TEE9 199 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 GNG12Q9UBI6 72 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 PATE4P0C8F1 98 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 CASP6P55212 293 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 RAB31Q13636 194 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 SFRP5Q5T4F7 317 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 PHYHIPLQ96FC7 376 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 BIN3Q9NQY0 253 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 ELF5Q9UKW6 265 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-220ENST00000477528 TANC1Q9C0D5 1861 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 PRR19A6NJB7 356 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 LEUTXA8MZ59 168 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 TNFSF12O43508 249 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 GPM6AP51674 278 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 DHODHQ02127 395 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 SURF2Q15527 256 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-220ENST00000477528 C1orf100Q5SVJ3 147 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 ZADH2Q8N4Q0 377 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 ZNF485Q8NCK3 441 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 SARAFQ96BY9 339 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 MRPS24Q96EL2 167 aaKnown RBP12.91□□□□□ -0.34
HDAC6-220ENST00000477528 TMPRSS13Q9BYE2 586 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 NPIPB13A6NJU9 1138 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 NPIPB4C9JG80 1138 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 SH2D1BO14796 132 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 PGA4P0DJD7 388 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 PGA3P0DJD8 388 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 SOHLH1Q5JUK2 328 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 SHEQ5VZ18 495 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 LRRC75AQ8NAA5 344 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 OR2G3Q8NGZ4 309 aa12.91□□□□□ -0.34
HDAC6-220ENST00000477528 LINC00862A6NCI5 91 aa12.9□□□□□ -0.34
HDAC6-220ENST00000477528 MRPS34P82930 218 aaKnown RBP12.9□□□□□ -0.34
HDAC6-220ENST00000477528 Q6ZRG5 221 aa12.9□□□□□ -0.34
HDAC6-220ENST00000477528 RBMXL1Q96E39 390 aaKnown RBP12.9□□□□□ -0.34
HDAC6-220ENST00000477528 KPTNQ9Y664 436 aa12.9□□□□□ -0.34
HDAC6-220ENST00000477528 C17orf51A8MQB3 221 aa12.9□□□□□ -0.34
HDAC6-220ENST00000477528 PDCD6O75340 191 aa12.9□□□□□ -0.34
HDAC6-220ENST00000477528 VSIG10L2P0DP72 767 aa12.9□□□□□ -0.34
HDAC6-220ENST00000477528 PXDC1Q5TGL8 231 aa12.9□□□□□ -0.34
HDAC6-220ENST00000477528 DUSP13Q9UII6 198 aa12.9□□□□□ -0.34
HDAC6-220ENST00000477528 CLDN1O95832 211 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms