RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 INO80EQ8NBZ0 244 aaPredicted RBP14.37□□□□□ -0.11
TMEM53-208ENST00000476724 SEMA6DQ8NFY4 1073 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 SPSB1Q96BD6 273 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 SGK3Q96BR1 496 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 C5orf66Q9H5L9 145 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 MED13Q9UHV7 2174 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 ZNF292O60281 2723 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 ASPMQ8IZT6 3477 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 SFT2D2O95562 160 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 RLN2P04090 185 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 FGF2P09038 288 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 SERPINA2P20848 420 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 PSMB6P28072 239 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 SURF2Q15527 256 aaPredicted RBP14.37□□□□□ -0.11
TMEM53-208ENST00000476724 LRRC37A5PQ49AS3 106 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 OVCH2Q7RTZ1 564 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 YRDCQ86U90 279 aaKnown RBP14.37□□□□□ -0.11
TMEM53-208ENST00000476724 IL22RA1Q8N6P7 574 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 OR5D18Q8NGL1 313 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 OR1S1Q8NH92 325 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 CCDC120Q96HB5 630 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 RAB18Q9NP72 206 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 TMEM38BQ9NVV0 291 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 RASL12Q9NYN1 266 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 ZNF391Q9UJN7 358 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 RNF222A6NCQ9 220 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 C5orf51A6NDU8 294 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 POM121CA8CG34 1229 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 SYNGR3O43761 229 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 CRHP06850 196 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 NUP62P37198 522 aaPredicted RBP14.36□□□□□ -0.11
TMEM53-208ENST00000476724 SNU13P55769 128 aaKnown RBP14.36□□□□□ -0.11
TMEM53-208ENST00000476724 GGNQ86UU5 652 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 SULF2Q8IWU5 870 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 CSNK2A3Q8NEV1 391 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 OR5AP2Q8NGF4 316 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 NPRL2Q8WTW4 380 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 SLC39A7Q92504 469 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 PRRX2Q99811 253 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 ST6GALNAC5Q9BVH7 336 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 DNTTIP1Q9H147 329 aa14.36□□□□□ -0.11
TMEM53-208ENST00000476724 CNOT1A5YKK6 2376 aaKnown RBP14.36□□□□□ -0.11
TMEM53-208ENST00000476724 ZNF716A6NP11 495 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 DBHP09172 617 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 PRKACBP22694 351 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 ECI1P42126 302 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 STARP49675 285 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 RIPPLY2Q5TAB7 128 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 ATP1A1-AS1Q5TC04 95 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 AAED1Q7RTV5 226 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 GALNTL5Q7Z4T8 443 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 OR1F12Q8NHA8 337 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 ZNF837Q96EG3 531 aaPredicted RBP14.35□□□□□ -0.11
TMEM53-208ENST00000476724 CRLF2Q9HC73 371 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 CHMP1AQ9HD42 196 aaPredicted RBP14.35□□□□□ -0.11
TMEM53-208ENST00000476724 OSGIN2Q9Y236 505 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 ZFHX2Q9C0A1 2572 aaPredicted RBP14.35□□□□□ -0.11
TMEM53-208ENST00000476724 RIF1Q5UIP0 2472 aaKnown RBP14.35□□□□□ -0.11
TMEM53-208ENST00000476724 TRBV6-7A0A0A0MS04 114 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 EEF1E1-BLOC1S5C9J1V9 151 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 SERPINF1P36955 418 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 NPY4RP50391 375 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 CNN3Q15417 329 aaKnown RBP14.35□□□□□ -0.11
TMEM53-208ENST00000476724 SNAI3Q3KNW1 292 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 DCAF10Q5QP82 559 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 DTX1Q86Y01 620 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 BVESQ8NE79 360 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 PXT1Q8NFP0 134 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 OR2V1Q8NHB1 315 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 EMG1Q92979 244 aaKnown RBP14.35□□□□□ -0.11
TMEM53-208ENST00000476724 TMEM230Q96A57 120 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 PPA2Q9H2U2 334 aa14.35□□□□□ -0.11
TMEM53-208ENST00000476724 CDRT15L2A8MXV6 281 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 LINC01387J3KSC0 135 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 HPNP05981 417 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 CHRFAM7AQ494W8 412 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 ABLIM2Q6H8Q1 611 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 CLEC18BQ6UXF7 455 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 OR13G1Q8NGZ3 307 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 PIGTQ969N2 578 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 ADGRG7Q96K78 797 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 ARPC5LQ9BPX5 153 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 RTBDNQ9BSG5 229 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-208ENST00000476724 METTL9Q9H1A3 318 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 RGCCQ9H4X1 137 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 ELL3Q9HB65 397 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-208ENST00000476724 CNTRLQ7Z7A1 2325 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 C13orf42A0A1B0GVH6 325 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 FIGNL2A6NMB9 653 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 CYB561P49447 251 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 MTCP1P56278 107 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 PCBD1P61457 104 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 KRTAP27-1Q3LI81 207 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 PLEKHN1Q494U1 663 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-208ENST00000476724 PDSS1Q5T2R2 415 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 AADACL3Q5VUY0 350 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 MOB3CQ70IA8 216 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 OR10K1Q8NGX5 313 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 REEP6Q96HR9 211 aa14.34□□□□□ -0.11
TMEM53-208ENST00000476724 ZNF471Q9BX82 626 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms