RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 DGCR6Q14129 220 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 CLLU1OSQ5K130 101 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 TPTE2P1Q5T6R2 138 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 LUZP2Q86TE4 346 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 BLIDQ8IZY5 108 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 TMEM256Q8N2U0 113 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 TTC29Q8NA56 475 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 CCDC148Q8NFR7 591 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 OR9G4Q8NGQ1 327 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 OR6Q1Q8NGQ2 317 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 NRGNQ92686 78 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 GSDMAQ96QA5 445 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 XPO6Q96QU8 1125 aaKnown RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 TBL1YQ9BQ87 522 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 TEKT3Q9BXF9 490 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 ULBP2Q9BZM5 246 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 C1orf198Q9H425 327 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 GEMIN7Q9H840 131 aaKnown RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 FBXO6Q9NRD1 293 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 GCNT4Q9P109 453 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 MARCOQ9UEW3 520 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-211ENST00000476215 ENOPH1Q9UHY7 261 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 NID2Q14112 1375 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 CACNA1HO95180 2353 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 ZDBF2Q9HCK1 2354 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 MICAL3Q7RTP6 2002 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 PTPRSQ13332 1948 aa2.68□□□□□ -1.98
PTCD3-211ENST00000476215 CFAP54Q96N23 3096 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 DOCK5Q9H7D0 1870 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 SYCE1LA8MT33 242 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 H7C1H1 209 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 SLC37A4O43826 429 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 CCNB2O95067 398 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 TDP2O95551 362 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 HOXB8P17481 243 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-211ENST00000476215 CSNK2A2P19784 350 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-211ENST00000476215 TAS2R31P59538 309 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 LAMTOR4Q0VGL1 99 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 ART3Q13508 389 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 CUL2Q13617 745 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 KRTAP13-2Q52LG2 175 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 DNLZQ5SXM8 178 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 C1orf185Q5T7R7 199 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 ADNP2Q6IQ32 1131 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 EIF3MQ7L2H7 374 aaKnown RBP2.67□□□□□ -1.98
PTCD3-211ENST00000476215 OTUD6AQ7L8S5 288 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 SCD5Q86SK9 330 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 OR9A2Q8NGT5 310 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 C8orf44Q96CB5 159 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 ZNF317Q96PQ6 595 aaPredicted RBP2.67□□□□□ -1.98
PTCD3-211ENST00000476215 SULT4A1Q9BR01 284 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 OSBPL11Q9BXB4 747 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 ZYG11BQ9C0D3 744 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 TMEM38AQ9H6F2 299 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 TMEM27Q9HBJ8 222 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 MED4Q9NPJ6 270 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 RAB20Q9NX57 234 aa2.67□□□□□ -1.98
PTCD3-211ENST00000476215 IGKV1-8A0A0C4DH67 115 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 A0A0J9YXV3 536 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 ARL5CA6NH57 179 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 GABRR3A8MPY1 467 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 SLC9A3R1O14745 358 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-211ENST00000476215 LYPLA2O95372 231 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 FGFR1OPO95684 399 aaKnown RBP2.66□□□□□ -1.98
PTCD3-211ENST00000476215 HLA-DQB1P01920 261 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 CD74P04233 296 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 IL1RNP18510 177 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 CELP19835 753 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 HMOX2P30519 316 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 ARL2P36404 184 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 CCNG1P51959 295 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 PRRX1P54821 245 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 RPL23P62829 140 aaKnown RBP2.66□□□□□ -1.98
PTCD3-211ENST00000476215 RBMY1FQ15415 496 aaKnown RBP2.66□□□□□ -1.98
PTCD3-211ENST00000476215 TWF2Q6IBS0 349 aaKnown RBP2.66□□□□□ -1.98
PTCD3-211ENST00000476215 SPESP1Q6UW49 350 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 CBLN2Q8IUK8 224 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 GABRG1Q8N1C3 465 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 CSGALNACT2Q8N6G5 542 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 GATSQ8NAP1 163 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 GPR26Q8NDV2 337 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 OR13G1Q8NGZ3 307 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 SLC25A46Q96AG3 418 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 NRBF2Q96F24 287 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 RBBP8Q99708 897 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 LXNQ9BS40 222 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 RSG1Q9BU20 258 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 MYOZ1Q9NP98 299 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-211ENST00000476215 S4R3C0 116 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 TANC1Q9C0D5 1861 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 COL4A6Q14031 1691 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 TECTAO75443 2155 aa2.66□□□□□ -1.98
PTCD3-211ENST00000476215 EP300Q09472 2414 aaPredicted RBP2.66□□□□□ -1.98
PTCD3-211ENST00000476215 DNAH14Q0VDD8 3507 aa2.65□□□□□ -1.98
PTCD3-211ENST00000476215 ANKRD12Q6UB98 2062 aa2.65□□□□□ -1.98
PTCD3-211ENST00000476215 GPR179Q6PRD1 2367 aa2.65□□□□□ -1.98
PTCD3-211ENST00000476215 TRAV6A0A075B6T7 132 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 NDUFC2-KCTD14E9PQ53 114 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 PLPP1O14494 284 aa2.65□□□□□ -1.99
PTCD3-211ENST00000476215 DNALI1O14645 258 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms