RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 SLC22A31A6NKX4 558 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 SRSF10O75494 262 aaKnown RBP9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 MTRF1O75570 445 aaKnown RBP9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 ANXA8P13928 327 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 GLRA1P23415 457 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 EEF1B2P24534 225 aaKnown RBP9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 POU1F1P28069 291 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 MAP2K3P46734 347 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 GMFBP60983 142 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 EFNB1P98172 346 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 FLOT2Q14254 428 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 ZBTB37Q5TC79 503 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 TMEM236Q5W0B7 351 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 NCR3LG1Q68D85 454 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 TMEM42Q69YG0 159 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 SLC35E4Q6ICL7 350 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 ZNRF1Q8ND25 227 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 OR5R1Q8NH85 324 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 C17orf50Q8WW18 174 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 DUS3LQ96G46 650 aaKnown RBP9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 YY1AP1Q9H869 796 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 TCF7L1Q9HCS4 588 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 RASL12Q9NYN1 266 aa9.99□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 TRBV23-1A0A0A0MS06 115 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 TCRBV3S1A0A5B6 114 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 MEIOCA2RUB1 952 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 NKX6-3A6NJ46 265 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 OR5B21A6NL26 309 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 ZNF732B4DXR9 585 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 GSC2O15499 205 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 NOS1APO75052 506 aaPredicted RBP9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 ZNF254O75437 659 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 E2F6O75461 281 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 APOFQ13790 326 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 AANATQ16613 207 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 ACP7Q6ZNF0 438 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 ZNF679Q8IYX0 411 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 CD177Q8N6Q3 437 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 PPP1R35Q8TAP8 253 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 ZNF671Q8TAW3 534 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 H1FXQ92522 213 aaKnown RBP9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 PPP1R14AQ96A00 147 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 PBOV1Q9GZY1 135 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 NUFIP1Q9UHK0 495 aaKnown RBP9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 LAMP5Q9UJQ1 280 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 COPS3Q9UNS2 423 aa9.98□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 TMEM269A0A1B0GVZ9 245 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 A0A1W2PRD5 423 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 A0A1W2PRF3 423 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 A0A1W2PRM7 423 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 TSPAN15O95858 294 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 NDUFB7P17568 137 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 KIR2DS4P43632 304 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 RIPPLY1Q0D2K3 151 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 DMRTC1Q5HYR2 192 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 CEP78Q5JTW2 689 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 DHRS7BQ6IAN0 325 aaPredicted RBP9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 FAHD1Q6P587 224 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 KCTD18Q6PI47 426 aaPredicted RBP9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 KCTD8Q6ZWB6 473 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 KRT77Q7Z794 578 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 SPATA24Q86W54 205 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 POC1AQ8NBT0 407 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 OR5D13Q8NGL4 314 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 OR5K1Q8NHB7 308 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 OR51E1Q8TCB6 317 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 PIFOQ8TCI5 191 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 NRBF2Q96F24 287 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 HIST1H2AAQ96QV6 131 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 OR8B4Q96RC9 309 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 ELL3Q9HB65 397 aaPredicted RBP9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 GPR84Q9NQS5 396 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 DNAJB9Q9UBS3 223 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 POMPQ9Y244 141 aa9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 SF3B6Q9Y3B4 125 aaKnown RBP9.97□□□□□ -0.81
MSH5-SAPCD1-205ENST00000476085 A0A1B0GTI1 187 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 FAM90A8PA6NJQ4 464 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RFPL4AA6NLU0 287 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RFPL4AL1F8VTS6 287 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PSMD9O00233 223 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 GNGT2O14610 69 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 DHRS3O75911 302 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TTRP02766 147 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PGA5P0DJD9 388 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 FAHP16930 419 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MPZP25189 248 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 GABRA2P47869 451 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 DAPP51397 102 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 EFNB2P52799 333 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CRISP1P54107 249 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 EGR3Q06889 387 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SNAPC1Q16533 368 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TMEM200BQ69YZ2 307 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CCDC121Q6ZUS5 278 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MKXQ8IYA7 352 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ASB17Q8WXJ9 295 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 DNAJC9Q8WXX5 260 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CFHR4Q92496 578 aa9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 UTP4Q969X6 686 aaKnown RBP9.96□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SSX3Q99909 188 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms