RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 FAM96BQ9Y3D0 163 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 A0A0U1RQV5 110 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 A0A1B0GTI1 187 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 MEIOCA2RUB1 952 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 A6NIN4 97 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 M0R129 80 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 GNGT2O14610 69 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 SYNGR1O43759 233 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 FKBP6O75344 327 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 TSPAN15O95858 294 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 TTRP02766 147 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 FBP1P09467 338 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 ANXA8P13928 327 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 FAHP16930 419 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 NDUFB7P17568 137 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 GLRA1P23415 457 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 UBE2E1P51965 193 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 CRISP1P54107 249 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 CAV3P56539 151 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 RPS7P62081 194 aaKnown RBP5.72□□□□□ -1.49
HDAC3-207ENST00000475549 APOFQ13790 326 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 PTGES3Q15185 160 aaKnown RBP5.72□□□□□ -1.49
HDAC3-207ENST00000475549 TMEM42Q69YG0 159 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 TMEM200BQ69YZ2 307 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 FAHD1Q6P587 224 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 DEGS2Q6QHC5 323 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 GDPGP1Q6ZNW5 385 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 PLEKHG7Q6ZR37 379 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 KCTD8Q6ZWB6 473 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 KRT77Q7Z794 578 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 FTMTQ8N4E7 242 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 CCDC197Q8NCU1 140 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 BEND2Q8NDZ0 799 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 OR5A2Q8NGI9 324 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 H1FXQ92522 213 aaKnown RBP5.72□□□□□ -1.49
HDAC3-207ENST00000475549 RORBQ92753 470 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 UTP4Q969X6 686 aaKnown RBP5.72□□□□□ -1.49
HDAC3-207ENST00000475549 OR8B4Q96RC9 309 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 APOL4Q9BPW4 351 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 MROQ9BYG7 248 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 TTTY10Q9BZA0 68 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 YIPF3Q9GZM5 350 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 MMP27Q9H306 513 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 DPAGT1Q9H3H5 408 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 NIPAL2Q9H841 368 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 C19orf12Q9NSK7 152 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 TVP23BQ9NYZ1 205 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 DNAJB9Q9UBS3 223 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 LAMP5Q9UJQ1 280 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 POMPQ9Y244 141 aa5.72□□□□□ -1.49
HDAC3-207ENST00000475549 PRKDCP78527 4128 aaKnown RBP5.72□□□□□ -1.49
HDAC3-207ENST00000475549 PQLC2LA1A4F0 135 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 ACOD1A6NK06 481 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 RFPL4AA6NLU0 287 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 RFPL4AL1F8VTS6 287 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 F8VVB4 439 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 F8VWA3 439 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 M0QZ24 198 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 M0R1W7 72 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 NOS1APO75052 506 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-207ENST00000475549 E2F6O75461 281 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 EEF1B2P24534 225 aaKnown RBP5.71□□□□□ -1.5
HDAC3-207ENST00000475549 PRDX2P32119 198 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 TGFBR2P37173 567 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 MAP2K3P46734 347 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 GABRA2P47869 451 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 CEBPDP49716 269 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-207ENST00000475549 ERVK11-1P61568 191 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 GNG3P63215 75 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 CBX1P83916 185 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 EGR3Q06889 387 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 FLOT2Q14254 428 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 SNCBQ16143 134 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 SNAPC1Q16533 368 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 LDLRAD2Q5SZI1 272 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 AADACL4Q5VUY2 407 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 HAGHLQ6PII5 290 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-207ENST00000475549 ACP7Q6ZNF0 438 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 Q6ZSR3 168 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 MOB3CQ70IA8 216 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 SSX6Q7RTT6 188 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 THAP5Q7Z6K1 395 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 SPATA24Q86W54 205 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 MKXQ8IYA7 352 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF679Q8IYX0 411 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 CMTM4Q8IZR5 234 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 DYNAPQ8N1N2 210 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 HIST1H2AAQ96QV6 131 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 NRIP2Q9BQI9 281 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 PPA2Q9H2U2 334 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 ZNF556Q9HAH1 456 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 ADGRL4Q9HBW9 690 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 HES4Q9HCC6 221 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 ABCB9Q9NP78 766 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 PAPOLBQ9NRJ5 636 aaKnown RBP5.71□□□□□ -1.5
HDAC3-207ENST00000475549 NUFIP1Q9UHK0 495 aaKnown RBP5.71□□□□□ -1.5
HDAC3-207ENST00000475549 MRM2Q9UI43 246 aaKnown RBP5.71□□□□□ -1.5
HDAC3-207ENST00000475549 PIGLQ9Y2B2 252 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 WNK1Q9H4A3 2382 aa5.71□□□□□ -1.5
HDAC3-207ENST00000475549 A0A1W2PQ09 198 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms