RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NPFFR1Q9GZQ6 430 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 RANBP3Q9H6Z4 567 aaPredicted RBP11.39□□□□□ -0.59
CCDC78-209ENST00000474647 REEP1Q9H902 201 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 ZNF319Q9P2F9 582 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 NLKQ9UBE8 527 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 MPC1Q9Y5U8 109 aa11.39□□□□□ -0.59
CCDC78-209ENST00000474647 OR2AT4A6NND4 320 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 TNFRSF11BO00300 401 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 XPNPEP2O43895 674 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 CHST1O43916 411 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 SOX14O95416 240 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 ACAA1P09110 424 aaPredicted RBP11.38□□□□□ -0.59
CCDC78-209ENST00000474647 BMXP51813 675 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 HMGA2P52926 109 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 CAV3P56539 151 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 LOXL3P58215 753 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 PLA1AQ53H76 456 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 TEX30Q5JUR7 227 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 HCP5Q6MZN7 132 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 PRSS45Q7RTY3 260 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 OR4S1Q8NGB4 309 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 OR5P3Q8WZ94 311 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 OTULINQ96BN8 352 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 RNF170Q96K19 258 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 INTS14Q96SY0 518 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 ABHD6Q9BV23 337 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 MMP28Q9H239 520 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 NECAP2Q9NVZ3 263 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 AURKAIP1Q9NWT8 199 aaPredicted RBP11.38□□□□□ -0.59
CCDC78-209ENST00000474647 IL20Q9NYY1 176 aa11.38□□□□□ -0.59
CCDC78-209ENST00000474647 SAMHD1Q9Y3Z3 626 aaKnown RBP11.38□□□□□ -0.59
CCDC78-209ENST00000474647 KMT2CQ8NEZ4 4911 aaKnown RBP11.38□□□□□ -0.59
CCDC78-209ENST00000474647 GNGT2O14610 69 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 IFNGP01579 166 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 H2BFMP0C1H6 154 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 ACKR3P25106 362 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 GPM6AP51674 278 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 SLC25A1P53007 311 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 HABP2Q14520 560 aaPredicted RBP11.37□□□□□ -0.59
CCDC78-209ENST00000474647 RCN1Q15293 331 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 TIGD4Q8IY51 512 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 MKXQ8IYA7 352 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 ZDHHC23Q8IYP9 409 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 PQLC1Q8N2U9 271 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 OR2T33Q8NG76 320 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 OR4Q3Q8NH05 313 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 RNF133Q8WVZ7 376 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 HPSE2Q8WWQ2 592 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 R3HDM4Q96D70 268 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 AMELYQ99218 206 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 NMNAT2Q9BZQ4 307 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 FGF23Q9GZV9 251 aaPredicted RBP11.37□□□□□ -0.59
CCDC78-209ENST00000474647 RGCCQ9H4X1 137 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 MED20Q9H944 212 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 ABCB9Q9NP78 766 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 U3KQV3 271 aa11.37□□□□□ -0.59
CCDC78-209ENST00000474647 IGKV1D-17A0A075B6S4 117 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 TRBV23-1A0A0A0MS06 115 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 FAM183AA6NL82 134 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 RIIAD1A6NNX1 92 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 PEX14O75381 377 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 RHBDL1O75783 438 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 CCNB2O95067 398 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 GASTP01350 101 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 CD28P10747 220 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 ZNF3P17036 446 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 COX7A1P24310 79 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 BLVRAP53004 296 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 LGALS4P56470 323 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 PPP1R8Q12972 351 aaKnown RBP11.36□□□□□ -0.59
CCDC78-209ENST00000474647 ARSJQ5FYB0 599 aaPredicted RBP11.36□□□□□ -0.59
CCDC78-209ENST00000474647 CRIP3Q6Q6R5 217 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 RASSF6Q6ZTQ3 369 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 AMIGO2Q86SJ2 522 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.36□□□□□ -0.59
CCDC78-209ENST00000474647 LINC00471Q8N535 108 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 AQP11Q8NBQ7 271 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 PHF21AQ96BD5 680 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 CENPNQ96H22 339 aaPredicted RBP11.36□□□□□ -0.59
CCDC78-209ENST00000474647 AJUBAQ96IF1 538 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 HIST1H2AAQ96QV6 131 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 MEGF9Q9H1U4 602 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 BAIAP2Q9UQB8 552 aa11.36□□□□□ -0.59
CCDC78-209ENST00000474647 ARRDC5A6NEK1 342 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 E2F6O75461 281 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 CST4P01036 141 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 PSG2P11465 335 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 GSTT1P30711 240 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 DCTDP32321 178 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 OPRL1P41146 370 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 MICAQ29983 383 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 CEP78Q5JTW2 689 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 LINC01590Q5TEZ4 76 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 LIAT1Q6ZQX7 453 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 TMEM179BQ7Z7N9 219 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 OR4F17Q8NGA8 305 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 OR5K1Q8NHB7 308 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 FAM81AQ8TBF8 368 aa11.35□□□□□ -0.59
CCDC78-209ENST00000474647 NRBF2Q96F24 287 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms