RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 RRP8O43159 456 aaKnown RBP8.49□□□□□ -1.05
USP39-214ENST00000474572 EFSO43281 561 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 CST4P01036 141 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 IGKV1D-12P01611 117 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 CD8AP01732 235 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 SERPINA5P05154 406 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 ZNF35P13682 527 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 FPR2P25090 351 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 MPGP29372 298 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 PMELP40967 661 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 OR3A2P47893 321 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 ATP1B3P54709 279 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 TAS2R31P59538 309 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 CAMK2BQ13554 666 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 GUSBP1Q15486 140 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 SCGB2B2Q4G0G5 96 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 C4orf46Q504U0 113 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 DMRTC1Q5HYR2 192 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 DCAF12L2Q5VW00 463 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 SIGIRRQ6IA17 410 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 TEX261Q6UWH6 196 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 TMPRSS7Q7RTY8 843 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 MCEMP1Q8IX19 187 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 ZSCAN4Q8NAM6 433 aaPredicted RBP8.49□□□□□ -1.05
USP39-214ENST00000474572 TMEM185AQ8NFB2 350 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 FDCSPQ8NFU4 85 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 OR5M8Q8NGP6 311 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 OR1K1Q8NGR3 316 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 MITD1Q8WV92 249 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 EMG1Q92979 244 aaKnown RBP8.49□□□□□ -1.05
USP39-214ENST00000474572 CHIAQ9BZP6 476 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 DEFB127Q9H1M4 99 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 GLRX2Q9NS18 164 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 EIF3KQ9UBQ5 218 aaKnown RBP8.49□□□□□ -1.05
USP39-214ENST00000474572 PRSS50Q9UI38 385 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 GPR132Q9UNW8 380 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 CSAG2Q9Y5P2 127 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 U3KQ87 197 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 BDP1A6H8Y1 2624 aa8.49□□□□□ -1.05
USP39-214ENST00000474572 TRAV14DV4A0A0A6YYC5 116 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 A0A0B4J2A0 478 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 SLC22A20A6NK97 555 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 DBX1A6NMT0 343 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 MCRIP1C9JLW8 97 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 TM4SF5O14894 197 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 SLC22A5O76082 557 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 MPC2O95563 127 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 IL18BPO95998 194 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 HLA-AP01891 365 aaKnown RBP8.48□□□□□ -1.05
USP39-214ENST00000474572 HLA-HP01893 362 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 PMP2P02689 132 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 IFNA6P05013 189 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 CSN2P05814 226 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 TMEM225BP0DP42 221 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 PPP3CBP16298 524 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 CXCL2P19875 107 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 C4BPBP20851 252 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 DTYMKP23919 212 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 CHATP28329 748 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 NBL1P41271 181 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 ZNF81P51508 661 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 TAS2R46P59540 309 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 PDZK1IP1Q13113 114 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 PPP1R1AQ13522 171 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 ARFRP1Q13795 201 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 RTP5Q14D33 572 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 FBXW9Q5XUX1 488 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 C17orf107Q6ZR85 190 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 MOB3CQ70IA8 216 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 TMED4Q7Z7H5 227 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 SAXO1Q8IYX7 474 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 ZNF680Q8NEM1 530 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 TERB2Q8NHR7 220 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 BCL2L2Q92843 193 aaPredicted RBP8.48□□□□□ -1.05
USP39-214ENST00000474572 TMEM230Q96A57 120 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 APOBEC3DQ96AK3 386 aaPredicted RBP8.48□□□□□ -1.05
USP39-214ENST00000474572 GMPPAQ96IJ6 420 aaPredicted RBP8.48□□□□□ -1.05
USP39-214ENST00000474572 BOD1Q96IK1 185 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 LDAHQ9H6V9 325 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 PLSCR2Q9NRY7 297 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 SHPKQ9UHJ6 478 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 EDARQ9UNE0 448 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 SLC7A11Q9UPY5 501 aa8.48□□□□□ -1.05
USP39-214ENST00000474572 MYO7BQ6PIF6 2116 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 WDFY3Q8IZQ1 3526 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 A0A096LPE4 126 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 TRAV17A0A0B4J275 112 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM230AA0A1W2PPH8 454 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 A0A1W2PPZ6 126 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 PQLC2LA1A4F0 135 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A10PA6NDY2 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A18PA6NE21 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A16PA6NEW6 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A20PA6NIJ5 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A8PA6NJQ4 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A7PA6NKC0 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 RFPL4AA6NLU0 287 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A22PA8MWA6 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A12PA8MX19 464 aa8.47□□□□□ -1.05
USP39-214ENST00000474572 FAM90A5PA8MXJ8 464 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms