RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 POMT1Q9Y6A1 747 aa15.25■□□□□ 0.03
COL7A1-209ENST00000474432 A0A1B0GVI7 797 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 OR2AT4A6NND4 320 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 RNASEK-C17orf49H0YIS7 233 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 PSG2P11465 335 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 FASP25445 335 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 RIPPLY1Q0D2K3 151 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 ZNF829Q3KNS6 432 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-209ENST00000474432 LRRC10Q5BKY1 277 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 PLEKHG7Q6ZR37 379 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 MOB3CQ70IA8 216 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 SSX6Q7RTT6 188 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 ELMOD2Q8IZ81 293 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 HIST1H2AAQ96QV6 131 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 CIB1Q99828 191 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 SLITRK2Q9H156 845 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 SEMA6AQ9H2E6 1030 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 SIRT7Q9NRC8 400 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 CLN6Q9NWW5 311 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 ONECUT1Q9UBC0 465 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 IKZF2Q9UKS7 526 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 PIGLQ9Y2B2 252 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 V9GYS6 101 aa15.24■□□□□ 0.03
COL7A1-209ENST00000474432 SLC22A31A6NKX4 558 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 OR5B21A6NL26 309 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 DHRS3O75911 302 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 IGHV4-59P01825 116 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 GLRA1P23415 457 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 IER3P46695 156 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 CAV3P56539 151 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 ZNF684Q5T5D7 378 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 ZDHHC13Q8IUH4 622 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 OR14K1Q8NGZ2 314 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 SSMEM1Q8WWF3 244 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 MED30Q96HR3 178 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 MNTQ99583 582 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 PRRG3Q9BZD7 231 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 ELL3Q9HB65 397 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-209ENST00000474432 SLC25A10Q9UBX3 287 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-209ENST00000474432 R4GMQ9 66 aa15.23■□□□□ 0.03
COL7A1-209ENST00000474432 LOC110117498-PIK3R3F6TDL0 507 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 NDUFA7O95182 113 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 SRSF4Q08170 494 aaKnown RBP15.22■□□□□ 0.03
COL7A1-209ENST00000474432 KLRD1Q13241 179 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 C1orf146Q5VVC0 180 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 PLCXD3Q63HM9 321 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 HAGHLQ6PII5 290 aaPredicted RBP15.22■□□□□ 0.03
COL7A1-209ENST00000474432 C1orf122Q6ZSJ8 110 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 THAP5Q7Z6K1 395 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 ZNRF1Q8ND25 227 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 H1FXQ92522 213 aaKnown RBP15.22■□□□□ 0.03
COL7A1-209ENST00000474432 SDSLQ96GA7 329 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 ZNF488Q96MN9 340 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 ENPP5Q9UJA9 477 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 OR52A1Q9UKL2 312 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 SLC22A13Q9Y226 551 aa15.22■□□□□ 0.03
COL7A1-209ENST00000474432 NKX6-3A6NJ46 265 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 SYNGR1O43759 233 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 MTRF1O75570 445 aaKnown RBP15.21■□□□□ 0.03
COL7A1-209ENST00000474432 NRASP01111 189 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 RAG2P55895 527 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 EGR3Q06889 387 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 HCP5Q6MZN7 132 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 COMMD2Q86X83 199 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 PNKDQ8N490 385 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 CD177Q8N6Q3 437 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 POC1AQ8NBT0 407 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 OR51G2Q8NGK0 314 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 ZNF671Q8TAW3 534 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 RNF166Q96A37 237 aaPredicted RBP15.21■□□□□ 0.03
COL7A1-209ENST00000474432 GABARAPL3Q9BY60 117 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 MOB1AQ9H8S9 216 aa15.21■□□□□ 0.03
COL7A1-209ENST00000474432 H2AFY2Q9P0M6 372 aaPredicted RBP15.21■□□□□ 0.03
COL7A1-209ENST00000474432 PQLC2LA1A4F0 135 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 A6NIN4 97 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 ZNF670-ZNF695F2Z2N8 137 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 GPR137BO60478 399 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 NOS1APO75052 506 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-209ENST00000474432 ATP5HO75947 161 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 PGA5P0DJD9 388 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 CCL1P22362 96 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 GABRA2P47869 451 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 RASSF2P50749 326 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 KRTAP10-3P60369 221 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 TAF9Q16594 264 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 ACP7Q6ZNF0 438 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 GID4Q8IVV7 300 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 TBC1D15Q8TC07 691 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 WFDC12Q8WWY7 111 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 DYRK2Q92630 601 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 OSBPL10Q9BXB5 764 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 GPR173Q9NS66 373 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 RASL12Q9NYN1 266 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 WARS2Q9UGM6 360 aaKnown RBP15.2■□□□□ 0.02
COL7A1-209ENST00000474432 OAZ3Q9UMX2 235 aa15.2■□□□□ 0.02
COL7A1-209ENST00000474432 A0A1W2PQL4 384 aaPredicted RBP15.19■□□□□ 0.02
COL7A1-209ENST00000474432 A0A1W2PRD5 423 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 A0A1W2PRF3 423 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 A0A1W2PRM7 423 aa15.19■□□□□ 0.02
COL7A1-209ENST00000474432 M0R1W7 72 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms