RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MED22Q15528 200 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 ZNF404Q494X3 552 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 PRAMEF6Q5VXH4 476 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 DCDC5Q6ZRR9 648 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 USP43Q70EL4 1123 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 SVOPQ8N4V2 548 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 BOLLQ8N9W6 283 aaKnown RBP15.6■□□□□ 0.09
CCDC171-206ENST00000474193 SEMA6DQ8NFY4 1073 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 OR5AK2Q8NH90 309 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 SGCDQ92629 289 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 LYZL4Q96KX0 146 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 TMEM246Q9BRR3 403 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 PLEKHA1Q9HB21 404 aa15.6■□□□□ 0.09
CCDC171-206ENST00000474193 TRAV38-1A0A0B4J264 116 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 TRIM77I1YAP6 450 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 NDUFA2O43678 99 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 DHRS3O75911 302 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 KIR3DL2P43630 455 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 NANOS3P60323 173 aaKnown RBP15.59■□□□□ 0.09
CCDC171-206ENST00000474193 SRSF2Q01130 221 aaKnown RBP15.59■□□□□ 0.09
CCDC171-206ENST00000474193 ZNF154Q13106 437 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 OR8B8Q15620 311 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 C1orf229Q6ZS94 237 aaPredicted RBP15.59■□□□□ 0.09
CCDC171-206ENST00000474193 DEFB108BQ8NET1 73 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 ZFAND2BQ8WV99 257 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 CLN8Q9UBY8 286 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 INSIG2Q9Y5U4 225 aa15.59■□□□□ 0.09
CCDC171-206ENST00000474193 ARHGAP32A7KAX9 2087 aa15.58■□□□□ 0.09
CCDC171-206ENST00000474193 LOC107986453A0A1B0GWG9 222 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 hCG_1807616A0A1W2PRN6 198 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 ANXA2P2A6NMY6 339 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 E9PI62 339 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 TNFAIP8O95379 198 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 ISG15P05161 165 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 PMELP40967 661 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 PITPNBP48739 271 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 NPY4RP50391 375 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 GTF2A1P52655 376 aaPredicted RBP15.58■□□□□ 0.08
CCDC171-206ENST00000474193 SEC61A1P61619 476 aaKnown RBP15.58■□□□□ 0.08
CCDC171-206ENST00000474193 HNRNPA0Q13151 305 aaKnown RBP15.58■□□□□ 0.08
CCDC171-206ENST00000474193 SPHARQ15513 63 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 MPPED2Q15777 294 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 ZBTB37Q5TC79 503 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 HIST1H2AAQ96QV6 131 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 MICU1Q9BPX6 476 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 PAPOLGQ9BWT3 736 aaKnown RBP15.58■□□□□ 0.08
CCDC171-206ENST00000474193 ABCB9Q9NP78 766 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 MMP26Q9NRE1 261 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 C1orf123Q9NWV4 160 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 ENPP5Q9UJA9 477 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 HHLA2Q9UM44 414 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 PIGLQ9Y2B2 252 aa15.58■□□□□ 0.08
CCDC171-206ENST00000474193 ZNF816-ZNF321PA0A0X1KG74 233 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 OR4C45A6NMZ5 311 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 DHRS7CA6NNS2 312 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 TRAPPC2LH3BP13 241 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 LGALS8O00214 317 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 PTBP3O95758 552 aaKnown RBP15.57■□□□□ 0.08
CCDC171-206ENST00000474193 IGLV3-1P01715 115 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 CCL1P22362 96 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 RBMXP38159 391 aaKnown RBP15.57■□□□□ 0.08
CCDC171-206ENST00000474193 BDH1Q02338 343 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 IRF3Q14653 427 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 CDK5R1Q15078 307 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 KCTD21Q4G0X4 260 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 FAM201AQ5SY85 155 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 CD276Q5ZPR3 534 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 RDH10Q8IZV5 341 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 RAB40AQ8WXH6 277 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 PIGCQ92535 297 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 OPN4Q9UHM6 478 aa15.57■□□□□ 0.08
CCDC171-206ENST00000474193 DOCK11Q5JSL3 2073 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 A0A1B0GTI1 187 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 H3BSH0 61 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 OGG1O15527 345 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 RGS9O75916 674 aaPredicted RBP15.56■□□□□ 0.08
CCDC171-206ENST00000474193 SERPINA3P01011 423 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 HSMCR30P0CW71 290 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 ZNF485Q8NCK3 441 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 OR13C3Q8NGS6 347 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 TSEN15Q8WW01 171 aaKnown RBP15.56■□□□□ 0.08
CCDC171-206ENST00000474193 RNF166Q96A37 237 aaPredicted RBP15.56■□□□□ 0.08
CCDC171-206ENST00000474193 SMIM19Q96E16 107 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 PDCD1LG2Q9BQ51 273 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 NUP50Q9UKX7 468 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 RHBDD3Q9Y3P4 386 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 MPC1Q9Y5U8 109 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 V9GYS6 101 aa15.56■□□□□ 0.08
CCDC171-206ENST00000474193 ZFPL1O95159 310 aa15.55■□□□□ 0.08
CCDC171-206ENST00000474193 VENTXO95231 258 aa15.55■□□□□ 0.08
CCDC171-206ENST00000474193 CST4P01036 141 aa15.55■□□□□ 0.08
CCDC171-206ENST00000474193 ZNF20P17024 532 aa15.55■□□□□ 0.08
CCDC171-206ENST00000474193 CELP19835 753 aa15.55■□□□□ 0.08
CCDC171-206ENST00000474193 ACKR3P25106 362 aa15.55■□□□□ 0.08
CCDC171-206ENST00000474193 MAP2K4P45985 399 aa15.55■□□□□ 0.08
CCDC171-206ENST00000474193 HILS1P60008 231 aa15.55■□□□□ 0.08
CCDC171-206ENST00000474193 ACSM1Q08AH1 577 aa15.55■□□□□ 0.08
CCDC171-206ENST00000474193 TBCEQ15813 527 aaPredicted RBP15.55■□□□□ 0.08
CCDC171-206ENST00000474193 SFRP4Q6FHJ7 346 aaPredicted RBP15.55■□□□□ 0.08
CCDC171-206ENST00000474193 ZFP41Q8N8Y5 198 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms