RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 C1orf147Q96MC9 270 aaPredicted RBP8.72□□□□□ -1.01
CASC3-204ENST00000474190 SPACA5Q96QH8 159 aa8.72□□□□□ -1.01
CASC3-204ENST00000474190 FOXC2Q99958 501 aa8.72□□□□□ -1.01
CASC3-204ENST00000474190 RAB1BQ9H0U4 201 aa8.72□□□□□ -1.01
CASC3-204ENST00000474190 METTL17Q9H7H0 456 aaPredicted RBP8.72□□□□□ -1.01
CASC3-204ENST00000474190 TREM2Q9NZC2 230 aa8.72□□□□□ -1.01
CASC3-204ENST00000474190 FBXO9Q9UK97 447 aaPredicted RBP8.72□□□□□ -1.01
CASC3-204ENST00000474190 NAV3Q8IVL0 2385 aa8.72□□□□□ -1.01
CASC3-204ENST00000474190 IGHV4-30-2A0A087WSY4 118 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 A0A0G2JK05 382 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 IGHV1-69-2A0A0G2JMI3 117 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 OR5B21A6NL26 309 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 ZNF732B4DXR9 585 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 CDIPTO14735 213 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 SULT1B1O43704 296 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 SYNGR1O43759 233 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 CDC14BO60729 498 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 GATBO75879 557 aaKnown RBP8.71□□□□□ -1.02
CASC3-204ENST00000474190 RGS9O75916 674 aaPredicted RBP8.71□□□□□ -1.02
CASC3-204ENST00000474190 ALDOBP05062 364 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 DAOP14920 347 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 CD36P16671 472 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 GALP22466 123 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 AZGP1P25311 298 aaKnown RBP8.71□□□□□ -1.02
CASC3-204ENST00000474190 GIFP27352 417 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 FGF9P31371 208 aaPredicted RBP8.71□□□□□ -1.02
CASC3-204ENST00000474190 ZNF181Q2M3W8 571 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 FAM166AQ6J272 317 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 ASCL4Q6XD76 172 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 SPERTQ8NA61 448 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 SCCPDHQ8NBX0 429 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 WFDC11Q8NEX6 87 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 C10orf105Q8TEF2 133 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 TSEN15Q8WW01 171 aaKnown RBP8.71□□□□□ -1.02
CASC3-204ENST00000474190 RDH5Q92781 318 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 CENPOQ9BU64 300 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 SAP30LQ9HAJ7 183 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 TMEM106BQ9NUM4 274 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 UFSP2Q9NUQ7 469 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 TXNL4BQ9NX01 149 aaKnown RBP8.71□□□□□ -1.02
CASC3-204ENST00000474190 FOXJ3Q9UPW0 622 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 ACANP16112 2415 aa8.71□□□□□ -1.02
CASC3-204ENST00000474190 LRP5LA4QPB2 252 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 TMEM178BH3BS89 294 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 SSX4O60224 188 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 NOS1APO75052 506 aaPredicted RBP8.7□□□□□ -1.02
CASC3-204ENST00000474190 CYB5R3P00387 301 aaPredicted RBP8.7□□□□□ -1.02
CASC3-204ENST00000474190 GRPP07492 148 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 ZNF20P17024 532 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 HOXB4P17483 251 aaPredicted RBP8.7□□□□□ -1.02
CASC3-204ENST00000474190 PSMA1P25786 263 aaKnown RBP8.7□□□□□ -1.02
CASC3-204ENST00000474190 GNALP38405 381 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 FUT6P51993 359 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 GNG3P63215 75 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 CTF1Q16619 201 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 C22orf42Q6IC83 251 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 PRSS57Q6UWY2 283 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 OR5D14Q8NGL3 314 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 TRMT10AQ8TBZ6 339 aaKnown RBP8.7□□□□□ -1.02
CASC3-204ENST00000474190 SLC25A28Q96A46 364 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 SPSB1Q96BD6 273 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 CYYR1Q96J86 154 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 ZNF488Q96MN9 340 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 MICU1Q9BPX6 476 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 RTL8AQ9BWD3 113 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 FUNDC2Q9BWH2 189 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 WDR13Q9H1Z4 485 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 PLEKHA1Q9HB21 404 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 HES4Q9HCC6 221 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 ABCB9Q9NP78 766 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 C1orf123Q9NWV4 160 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 MTCH1Q9NZJ7 389 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 STUB1Q9UNE7 303 aa8.7□□□□□ -1.02
CASC3-204ENST00000474190 FLNAP21333 2647 aaKnown RBP8.69□□□□□ -1.02
CASC3-204ENST00000474190 FAM230AA0A1W2PPH8 454 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 TRIM64BA6NI03 449 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 TMEM210A6NLX4 147 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 ANXA2P2A6NMY6 339 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 SRRM5B3KS81 715 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 IGHV2-70P01814 119 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 ACAA1P09110 424 aaPredicted RBP8.69□□□□□ -1.02
CASC3-204ENST00000474190 PGA5P0DJD9 388 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 BMP4P12644 408 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 SRMP19623 302 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 RAB3AP20336 220 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 HAAOP46952 286 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 SRP9P49458 86 aaKnown RBP8.69□□□□□ -1.02
CASC3-204ENST00000474190 OR10A3P58181 314 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 PDZK1IP1Q13113 114 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 ZMYND11Q15326 602 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 TRAM1Q15629 374 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 KISS1Q15726 138 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 HAGHLQ6PII5 290 aaPredicted RBP8.69□□□□□ -1.02
CASC3-204ENST00000474190 SPNS3Q6ZMD2 512 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 FTMTQ8N4E7 242 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 Q8NFD4 153 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 OR8S1Q8NH09 359 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 PHYHIPQ92561 330 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 ERGIC1Q969X5 290 aa8.69□□□□□ -1.02
CASC3-204ENST00000474190 RFT1Q96AA3 541 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms