RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ALX3O95076 343 aa16.8■□□□□ 0.28
APP-215ENST00000474136 PSMB9P28065 219 aa16.8■□□□□ 0.28
APP-215ENST00000474136 MMP16P51512 607 aa16.8■□□□□ 0.28
APP-215ENST00000474136 TAF9Q16594 264 aa16.8■□□□□ 0.28
APP-215ENST00000474136 FDX2Q6P4F2 183 aa16.8■□□□□ 0.28
APP-215ENST00000474136 RPL22L1Q6P5R6 122 aaKnown RBP16.8■□□□□ 0.28
APP-215ENST00000474136 MUC20Q8N307 709 aaPredicted RBP16.8■□□□□ 0.28
APP-215ENST00000474136 OR1F12Q8NHA8 337 aa16.8■□□□□ 0.28
APP-215ENST00000474136 FAM110DQ8TAY7 271 aaPredicted RBP16.8■□□□□ 0.28
APP-215ENST00000474136 PELI1Q96FA3 418 aa16.8■□□□□ 0.28
APP-215ENST00000474136 OR2V2Q96R30 315 aa16.8■□□□□ 0.28
APP-215ENST00000474136 OR5M11Q96RB7 305 aa16.8■□□□□ 0.28
APP-215ENST00000474136 TMEM165Q9HC07 324 aa16.8■□□□□ 0.28
APP-215ENST00000474136 PNRC2Q9NPJ4 139 aaKnown RBP16.8■□□□□ 0.28
APP-215ENST00000474136 IL19Q9UHD0 177 aa16.8■□□□□ 0.28
APP-215ENST00000474136 KIR2DS1A0A191URI9 304 aa16.79■□□□□ 0.28
APP-215ENST00000474136 ABHD16AO95870 558 aa16.79■□□□□ 0.28
APP-215ENST00000474136 MELTFP08582 738 aa16.79■□□□□ 0.28
APP-215ENST00000474136 HSMCR30P0CW71 290 aa16.79■□□□□ 0.28
APP-215ENST00000474136 ALDH3B2P48448 385 aa16.79■□□□□ 0.28
APP-215ENST00000474136 TPTEP56180 551 aa16.79■□□□□ 0.28
APP-215ENST00000474136 FGF12P61328 243 aa16.79■□□□□ 0.28
APP-215ENST00000474136 HLXQ14774 488 aaPredicted RBP16.79■□□□□ 0.28
APP-215ENST00000474136 ZNF420Q8TAQ5 688 aaPredicted RBP16.79■□□□□ 0.28
APP-215ENST00000474136 MOB1AQ9H8S9 216 aa16.79■□□□□ 0.28
APP-215ENST00000474136 GCM1Q9NP62 436 aa16.79■□□□□ 0.28
APP-215ENST00000474136 CYB5R3P00387 301 aaPredicted RBP16.78■□□□□ 0.28
APP-215ENST00000474136 CD1AP06126 327 aa16.78■□□□□ 0.28
APP-215ENST00000474136 CPEP16870 476 aa16.78■□□□□ 0.28
APP-215ENST00000474136 OTX1P32242 354 aaPredicted RBP16.78■□□□□ 0.28
APP-215ENST00000474136 HTR5AP47898 357 aa16.78■□□□□ 0.28
APP-215ENST00000474136 CCR9P51686 369 aa16.78■□□□□ 0.28
APP-215ENST00000474136 TPBGQ13641 420 aa16.78■□□□□ 0.28
APP-215ENST00000474136 DRAM2Q6UX65 266 aa16.78■□□□□ 0.28
APP-215ENST00000474136 GPR141Q7Z602 305 aa16.78■□□□□ 0.28
APP-215ENST00000474136 LINC01006Q8NI28 216 aa16.78■□□□□ 0.28
APP-215ENST00000474136 UFD1Q92890 307 aa16.78■□□□□ 0.28
APP-215ENST00000474136 CMBLQ96DG6 245 aa16.78■□□□□ 0.28
APP-215ENST00000474136 NUDT16L1Q9BRJ7 211 aaKnown RBP16.78■□□□□ 0.28
APP-215ENST00000474136 TTTY10Q9BZA0 68 aa16.78■□□□□ 0.28
APP-215ENST00000474136 NOX4Q9NPH5 578 aa16.78■□□□□ 0.28
APP-215ENST00000474136 BATF3Q9NR55 127 aa16.78■□□□□ 0.28
APP-215ENST00000474136 ACOXLQ9NUZ1 547 aa16.78■□□□□ 0.28
APP-215ENST00000474136 R4GMQ9 66 aa16.78■□□□□ 0.28
APP-215ENST00000474136 KMT2CQ8NEZ4 4911 aaKnown RBP16.78■□□□□ 0.28
APP-215ENST00000474136 TMEM269A0A1B0GVZ9 245 aa16.77■□□□□ 0.28
APP-215ENST00000474136 PSMD9O00233 223 aa16.77■□□□□ 0.28
APP-215ENST00000474136 OGG1O15527 345 aa16.77■□□□□ 0.28
APP-215ENST00000474136 INMTO95050 263 aa16.77■□□□□ 0.28
APP-215ENST00000474136 KITLGP21583 273 aa16.77■□□□□ 0.28
APP-215ENST00000474136 TRAM1Q15629 374 aa16.77■□□□□ 0.28
APP-215ENST00000474136 FAM201AQ5SY85 155 aa16.77■□□□□ 0.28
APP-215ENST00000474136 GPR157Q5UAW9 335 aa16.77■□□□□ 0.28
APP-215ENST00000474136 ARL9Q6T311 187 aa16.77■□□□□ 0.28
APP-215ENST00000474136 NEIL1Q96FI4 390 aaPredicted RBP16.77■□□□□ 0.28
APP-215ENST00000474136 SLC30A2Q9BRI3 323 aa16.77■□□□□ 0.28
APP-215ENST00000474136 TMEM246Q9BRR3 403 aa16.77■□□□□ 0.28
APP-215ENST00000474136 NDUFA13Q9P0J0 144 aa16.77■□□□□ 0.28
APP-215ENST00000474136 MIOXQ9UGB7 285 aa16.77■□□□□ 0.28
APP-215ENST00000474136 IGHV3-64DA0A0J9YX35 117 aa16.76■□□□□ 0.27
APP-215ENST00000474136 PRR32B1ATL7 298 aa16.76■□□□□ 0.27
APP-215ENST00000474136 CCRL2O00421 344 aa16.76■□□□□ 0.27
APP-215ENST00000474136 MAGEB4O15481 346 aaPredicted RBP16.76■□□□□ 0.27
APP-215ENST00000474136 CLPXO76031 633 aa16.76■□□□□ 0.27
APP-215ENST00000474136 RPP14O95059 124 aaKnown RBP16.76■□□□□ 0.27
APP-215ENST00000474136 PSMA1P25786 263 aaKnown RBP16.76■□□□□ 0.27
APP-215ENST00000474136 PROK1P58294 105 aa16.76■□□□□ 0.27
APP-215ENST00000474136 PSMA6P60900 246 aaKnown RBP16.76■□□□□ 0.27
APP-215ENST00000474136 ALKBH1Q13686 389 aaKnown RBP16.76■□□□□ 0.27
APP-215ENST00000474136 PDCD1Q15116 288 aa16.76■□□□□ 0.27
APP-215ENST00000474136 OR5AS1Q8N127 324 aa16.76■□□□□ 0.27
APP-215ENST00000474136 TMEM86BQ8N661 226 aa16.76■□□□□ 0.27
APP-215ENST00000474136 TCF7L1Q9HCS4 588 aa16.76■□□□□ 0.27
APP-215ENST00000474136 STARD10Q9Y365 291 aa16.76■□□□□ 0.27
APP-215ENST00000474136 TRBV2A0A0J9YWF9 115 aa16.75■□□□□ 0.27
APP-215ENST00000474136 F5H5K5 113 aa16.75■□□□□ 0.27
APP-215ENST00000474136 LOC110117498-PIK3R3F6TDL0 507 aa16.75■□□□□ 0.27
APP-215ENST00000474136 M0R135 149 aa16.75■□□□□ 0.27
APP-215ENST00000474136 CELP19835 753 aa16.75■□□□□ 0.27
APP-215ENST00000474136 RGS6P49758 472 aa16.75■□□□□ 0.27
APP-215ENST00000474136 GP2P55259 537 aaKnown RBP16.75■□□□□ 0.27
APP-215ENST00000474136 KRTAP27-1Q3LI81 207 aa16.75■□□□□ 0.27
APP-215ENST00000474136 MS4A15Q8N5U1 240 aa16.75■□□□□ 0.27
APP-215ENST00000474136 OR10AD1Q8NGE0 317 aa16.75■□□□□ 0.27
APP-215ENST00000474136 OR52H1Q8NGJ2 320 aa16.75■□□□□ 0.27
APP-215ENST00000474136 OR13F1Q8NGS4 319 aa16.75■□□□□ 0.27
APP-215ENST00000474136 OR2G2Q8NGZ5 317 aa16.75■□□□□ 0.27
APP-215ENST00000474136 SMIM19Q96E16 107 aa16.75■□□□□ 0.27
APP-215ENST00000474136 ZNF799Q96GE5 643 aa16.75■□□□□ 0.27
APP-215ENST00000474136 OPALINQ96PE5 141 aa16.75■□□□□ 0.27
APP-215ENST00000474136 COMMD4Q9H0A8 199 aa16.75■□□□□ 0.27
APP-215ENST00000474136 TBCCD1Q9NVR7 557 aa16.75■□□□□ 0.27
APP-215ENST00000474136 TMEM212A6NML5 194 aa16.74■□□□□ 0.27
APP-215ENST00000474136 PRB2P02812 416 aaPredicted RBP16.74■□□□□ 0.27
APP-215ENST00000474136 SFTPBP07988 381 aa16.74■□□□□ 0.27
APP-215ENST00000474136 PITPNBP48739 271 aa16.74■□□□□ 0.27
APP-215ENST00000474136 CX3CR1P49238 355 aa16.74■□□□□ 0.27
APP-215ENST00000474136 CDK5R1Q15078 307 aa16.74■□□□□ 0.27
APP-215ENST00000474136 TIMM50Q3ZCQ8 353 aa16.74■□□□□ 0.27
APP-215ENST00000474136 DMKNQ6E0U4 476 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms