RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 OR4M2Q8NGB6 313 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 TRMT10AQ8TBZ6 339 aaKnown RBP11.52□□□□□ -0.57
USF1-205ENST00000473969 FBLIM1Q8WUP2 373 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 MYDGFQ969H8 173 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 FGGYQ96C11 551 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 FAHD2AQ96GK7 314 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 ZNF649Q9BS31 505 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 SSBP3Q9BWW4 388 aaPredicted RBP11.52□□□□□ -0.57
USF1-205ENST00000473969 BABAM2Q9NXR7 383 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 ERVK-18Q9QC07 812 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 OR5V1Q9UGF6 321 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 ERGIC3Q9Y282 383 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 RRP15Q9Y3B9 282 aaKnown RBP11.52□□□□□ -0.57
USF1-205ENST00000473969 TPRKBQ9Y3C4 175 aa11.52□□□□□ -0.57
USF1-205ENST00000473969 OR4C45A6NMZ5 311 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 SRRM5B3KS81 715 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 PTGES3LE9PB15 166 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 ADAM20O43506 726 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 LHBP01229 141 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 GYPAP02724 150 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 MUC1P15941 1255 aaPredicted RBP11.51□□□□□ -0.57
USF1-205ENST00000473969 PRKACBP22694 351 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 GLRA1P23415 457 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
USF1-205ENST00000473969 HAAOP46952 286 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 PITPNBP48739 271 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 FUT6P51993 359 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 FAM120AOSQ5T036 256 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 OR2G6Q5TZ20 316 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 OR52N1Q8NH53 320 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 NPRL2Q8WTW4 380 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 TSEN15Q8WW01 171 aaKnown RBP11.51□□□□□ -0.57
USF1-205ENST00000473969 GATAD2BQ8WXI9 593 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 RNF166Q96A37 237 aaPredicted RBP11.51□□□□□ -0.57
USF1-205ENST00000473969 BORCS8Q96FH0 119 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 CHST5Q9GZS9 411 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 OR51I2Q9H344 312 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 CLN8Q9UBY8 286 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 DHDHQ9UQ10 334 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 POLDIP2Q9Y2S7 368 aa11.51□□□□□ -0.57
USF1-205ENST00000473969 IGHV3OR15-7A0A075B7D8 119 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 E9PI62 339 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 F5H0A9 414 aaPredicted RBP11.5□□□□□ -0.57
USF1-205ENST00000473969 J3QT63 122 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 AKR7A2O43488 359 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 ZFPL1O95159 310 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 MYF6P23409 242 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 NPY4RP50391 375 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 GTF2A1P52655 376 aaPredicted RBP11.5□□□□□ -0.57
USF1-205ENST00000473969 ATP1B3P54709 279 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 TAS2R43P59537 309 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 TEX36Q5VZQ5 186 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 BTNL3Q6UXE8 466 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 SLC36A1Q7Z2H8 476 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 AQP3Q92482 292 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 TMIGD2Q96BF3 282 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 C12orf43Q96C57 262 aaKnown RBP11.5□□□□□ -0.57
USF1-205ENST00000473969 CNBD2Q96M20 576 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 ANKRD60Q9BZ19 345 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 Q9H521 79 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 CLEC2DQ9UHP7 191 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 RAB26Q9ULW5 256 aa11.5□□□□□ -0.57
USF1-205ENST00000473969 TLN2Q9Y4G6 2542 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 PQLC2LA1A4F0 135 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 NKX6-3A6NJ46 265 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 J3QLI3 93 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 SLC1A7O00341 560 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 TMPRSS2O15393 492 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
USF1-205ENST00000473969 CYB5AP00167 134 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 IFNA2P01563 188 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 CD2P06729 351 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 EGR1P18146 543 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 SRD5A1P18405 259 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 ATF1P18846 271 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 ZFP36P26651 326 aaKnown RBP11.49□□□□□ -0.57
USF1-205ENST00000473969 RBP2P50120 134 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 CDK5R1Q15078 307 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 UBE2V2Q15819 145 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 CD276Q5ZPR3 534 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 LAIR2Q6ISS4 152 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 LYPD2Q6UXB3 125 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 UTS2BQ765I0 119 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 FAM90A1Q86YD7 464 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 SERPINA12Q8IW75 414 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 OR5D14Q8NGL3 314 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 GPR148Q8TDV2 347 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 ADAT3Q96EY9 351 aaPredicted RBP11.49□□□□□ -0.57
USF1-205ENST00000473969 PDCD1LG2Q9BQ51 273 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 MRI1Q9BV20 369 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 FGF23Q9GZV9 251 aaPredicted RBP11.49□□□□□ -0.57
USF1-205ENST00000473969 RASL12Q9NYN1 266 aa11.49□□□□□ -0.57
USF1-205ENST00000473969 NF1P21359 2839 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 A8MXK9 166 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 MAGEB3O15480 346 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 RHBDL1O75783 438 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 CDK1P06493 297 aa11.48□□□□□ -0.57
USF1-205ENST00000473969 C21orf33P30042 268 aaPredicted RBP11.48□□□□□ -0.57
USF1-205ENST00000473969 GABRA2P47869 451 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms