RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SRSF2Q01130 221 aaKnown RBP15.75■□□□□ 0.11
PTCD3-210ENST00000473829 KCNJ8Q15842 424 aa15.75■□□□□ 0.11
PTCD3-210ENST00000473829 C1QL2Q7Z5L3 287 aa15.75■□□□□ 0.11
PTCD3-210ENST00000473829 FGFRL1Q8N441 504 aa15.75■□□□□ 0.11
PTCD3-210ENST00000473829 MDFIQ99750 246 aa15.75■□□□□ 0.11
PTCD3-210ENST00000473829 RASSF4Q9H2L5 321 aa15.75■□□□□ 0.11
PTCD3-210ENST00000473829 TRIM36Q9NQ86 728 aa15.75■□□□□ 0.11
PTCD3-210ENST00000473829 IGHV2-70DA0A0C4DH43 119 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 PQLC2LA1A4F0 135 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 E9PI62 339 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 HTR1AP08908 422 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 MUC1P15941 1255 aaPredicted RBP15.74■□□□□ 0.11
PTCD3-210ENST00000473829 CAPGP40121 348 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 MICBQ29980 383 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 STUMQ69YW2 141 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 HAGHLQ6PII5 290 aaPredicted RBP15.74■□□□□ 0.11
PTCD3-210ENST00000473829 SYS1Q8N2H4 156 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 OR10AC1Q8NH08 325 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 NRG4Q8WWG1 115 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 AQP3Q92482 292 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 TECTBQ96PL2 329 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 PLEKHA1Q9HB21 404 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 FGF20Q9NP95 211 aaPredicted RBP15.74■□□□□ 0.11
PTCD3-210ENST00000473829 INPP5EQ9NRR6 644 aa15.74■□□□□ 0.11
PTCD3-210ENST00000473829 ANKRD61A6NGH8 418 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 OR4C45A6NMZ5 311 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 LIMS3P0CW19 117 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 LIMS4P0CW20 117 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 SLC34A1Q06495 639 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 UBE2V2Q15819 145 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 KLHL22Q53GT1 634 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 LAIR2Q6ISS4 152 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 FAM216BQ8N7L0 139 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 SETD9Q8NE22 299 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 OR5T2Q8NGG2 359 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 NPRL2Q8WTW4 380 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 RAB40AQ8WXH6 277 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 CCL13Q99616 98 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 JAM3Q9BX67 310 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 SNTG1Q9NSN8 517 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 KAAG1Q9UBP8 84 aa15.73■□□□□ 0.11
PTCD3-210ENST00000473829 TMPRSS2O15393 492 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 NDUFA2O43678 99 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 SYNGR1O43759 233 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 ISG15P05161 165 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 SELLP14151 372 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 CCR9P51686 369 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 PAX8Q06710 450 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 IL18R1Q13478 541 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 ALKBH1Q13686 389 aaKnown RBP15.72■□□□□ 0.11
PTCD3-210ENST00000473829 OR51A4Q8NGJ6 313 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 TRMT10AQ8TBZ6 339 aaKnown RBP15.72■□□□□ 0.11
PTCD3-210ENST00000473829 C12orf43Q96C57 262 aaKnown RBP15.72■□□□□ 0.11
PTCD3-210ENST00000473829 ADAT3Q96EY9 351 aaPredicted RBP15.72■□□□□ 0.11
PTCD3-210ENST00000473829 ZNF488Q96MN9 340 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 CHST5Q9GZS9 411 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 ERVK-18Q9QC07 812 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 METRNQ9UJH8 293 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 AUP1Q9Y679 476 aa15.72■□□□□ 0.11
PTCD3-210ENST00000473829 H0YAE9 185 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 J3QT63 122 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 DVL1O14640 695 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 EPHA1P21709 976 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 HAAOP46952 286 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 NPY4RP50391 375 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 ETV1P50549 477 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 KLF17Q5JT82 389 aaPredicted RBP15.71■□□□□ 0.11
PTCD3-210ENST00000473829 TMEM244Q5VVB8 128 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 CALHM1Q8IU99 346 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 CCDC54Q8NEL0 328 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 MRPL48Q96GC5 212 aaKnown RBP15.71■□□□□ 0.11
PTCD3-210ENST00000473829 NUDT16L1Q9BRJ7 211 aaKnown RBP15.71■□□□□ 0.11
PTCD3-210ENST00000473829 MRI1Q9BV20 369 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 DNAJB11Q9UBS4 358 aa15.71■□□□□ 0.11
PTCD3-210ENST00000473829 IGKV1-27A0A075B6S5 117 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 KIR2DS1A0A191URI9 304 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 FAM230AA0A1W2PPH8 454 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 GLRA1P23415 457 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 OR2G6Q5TZ20 316 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 XAF1Q6GPH4 301 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 BTNL3Q6UXE8 466 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 ANGPTL5Q86XS5 388 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 C8orf59Q8N0T1 100 aaPredicted RBP15.7■□□□□ 0.1
PTCD3-210ENST00000473829 BATF2Q8N1L9 274 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 POC1AQ8NBT0 407 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 ANGPTL6Q8NI99 470 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 NANPQ8TBE9 248 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 FBLIM1Q8WUP2 373 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 GAFA1Q96PS6 74 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 NLKQ9UBE8 527 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 HSPE1-MOB4S4R3N1 261 aa15.7■□□□□ 0.1
PTCD3-210ENST00000473829 IGKV1D-17A0A075B6S4 117 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 IGKV1-9A0A0C4DH69 117 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 PGA5P0DJD9 388 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 MPZP25189 248 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 TGM4P49221 684 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 GTF2A1P52655 376 aaPredicted RBP15.69■□□□□ 0.1
PTCD3-210ENST00000473829 ATPAF1Q5TC12 328 aaPredicted RBP15.69■□□□□ 0.1
PTCD3-210ENST00000473829 ZNF788Q6ZQV5 615 aa15.69■□□□□ 0.1
PTCD3-210ENST00000473829 ZNF573Q86YE8 665 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms