RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 LIN54Q6MZP7 749 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 DEGS2Q6QHC5 323 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 UNQ9370/PRO34162Q6UXP9 181 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 LRRC18Q8N456 261 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 RNF133Q8WVZ7 376 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 TCTEX1D2Q8WW35 142 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 SLAMF6Q96DU3 332 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 C12orf49Q9H741 205 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 UPB1Q9UBR1 384 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 LRP12Q9Y561 859 aa12.93□□□□□ -0.34
LMNA-213ENST00000473598 ZNF587BE7ETH6 402 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 PTGER4P35408 488 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 SRP9P49458 86 aaKnown RBP12.92□□□□□ -0.34
LMNA-213ENST00000473598 CCR6P51684 374 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 PITPNAQ00169 270 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 ALKBH2Q6NS38 261 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 FAM214BQ7L5A3 538 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 CD163Q86VB7 1156 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 GCNT2Q8N0V5 402 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 OR10S1Q8NGN2 331 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 FAM57AQ8TBR7 257 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 PHYHIPQ92561 330 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 OR14A2Q96R54 314 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 ASF1BQ9NVP2 202 aa12.92□□□□□ -0.34
LMNA-213ENST00000473598 A0A1W2PPK0 400 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
LMNA-213ENST00000473598 MBD3L3A6NE82 208 aaPredicted RBP12.91□□□□□ -0.34
LMNA-213ENST00000473598 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
LMNA-213ENST00000473598 FIGNL2A6NMB9 653 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 ABOP16442 354 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 OR3A2P47893 321 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 MMP15P51511 669 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 PSMA6P60900 246 aaKnown RBP12.91□□□□□ -0.34
LMNA-213ENST00000473598 PDZK1IP1Q13113 114 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 SLC25A35Q3KQZ1 300 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 NRN1LQ496H8 165 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 RTL6Q6ICC9 239 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 Q6ZTK2 550 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 DMRTC2Q8IXT2 367 aaPredicted RBP12.91□□□□□ -0.34
LMNA-213ENST00000473598 MBD3L2Q8NHZ7 208 aaPredicted RBP12.91□□□□□ -0.34
LMNA-213ENST00000473598 EGLN1Q9GZT9 426 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 TMPRSS5Q9H3S3 457 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 PRSS50Q9UI38 385 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 FBXL3Q9UKT7 428 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 ZNF281Q9Y2X9 895 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 EMC9Q9Y3B6 208 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 ZGRF1Q86YA3 2104 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 RER1O15258 196 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 ARPC5O15511 151 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 ZFPL1O95159 310 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 EIF4EP06730 217 aaKnown RBP12.91□□□□□ -0.34
LMNA-213ENST00000473598 H2BFMP0C1H6 154 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 B4GALT1P15291 398 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 ALKBH1Q13686 389 aaKnown RBP12.91□□□□□ -0.34
LMNA-213ENST00000473598 C9orf152Q5JTZ5 239 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 FDX2Q6P4F2 183 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 BAIAP2L2Q6UXY1 529 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 SEM1Q6ZVN7 128 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 NAA40Q86UY6 237 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 SLC22A24Q8N4F4 322 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 GJC3Q8NFK1 279 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 NEU1Q99519 415 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 CENPMQ9NSP4 180 aa12.91□□□□□ -0.34
LMNA-213ENST00000473598 SNRPGP15A8MWD9 76 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 ZNF878C9JN71 531 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 GSTZ1O43708 216 aaPredicted RBP12.9□□□□□ -0.34
LMNA-213ENST00000473598 CST2P09228 141 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 HIST1H3AP68431 136 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 TLE1Q04724 770 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 RBMS2Q15434 407 aaKnown RBP12.9□□□□□ -0.34
LMNA-213ENST00000473598 ELFN2Q5R3F8 820 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 C1orf185Q5T7R7 199 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 HIST2H3PS2Q5TEC6 136 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 FBXW9Q5XUX1 488 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 HIST2H3AQ71DI3 136 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 ZNF627Q7L945 461 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 ABHD12BQ7Z5M8 362 aaPredicted RBP12.9□□□□□ -0.34
LMNA-213ENST00000473598 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.9□□□□□ -0.34
LMNA-213ENST00000473598 SAMD12Q8N8I0 201 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 FBXO17Q96EF6 278 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 LURAP1Q96LR2 239 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 ABHD1Q96SE0 405 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 SSX3Q99909 188 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 GPN1Q9HCN4 374 aaPredicted RBP12.9□□□□□ -0.34
LMNA-213ENST00000473598 PNRC2Q9NPJ4 139 aaKnown RBP12.9□□□□□ -0.34
LMNA-213ENST00000473598 FRRS1LQ9P0K9 344 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 FAM215AQ9Y5M1 114 aa12.9□□□□□ -0.34
LMNA-213ENST00000473598 RP1L1Q8IWN7 2480 aaPredicted RBP12.9□□□□□ -0.34
LMNA-213ENST00000473598 NAP1L6A6NFF2 107 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 ZNF879B4DU55 563 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 PYCARD-AS1I3L0S3 204 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 PIN1P1O15428 100 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 SRSF10O75494 262 aaKnown RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 EPXP11678 715 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 RPA2P15927 270 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 MPGP29372 298 aa12.89□□□□□ -0.35
LMNA-213ENST00000473598 KIR2DL2P43627 348 aaPredicted RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 FOXG1P55316 489 aaPredicted RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 ARF1P84077 181 aaKnown RBP12.89□□□□□ -0.35
LMNA-213ENST00000473598 KLF9Q13886 244 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms