RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 ZNF732B4DXR9 585 aa15.08■□□□□ 0
SNX4-204ENST00000473417 CDIPTO14735 213 aa15.08■□□□□ 0
SNX4-204ENST00000473417 PIPP12273 146 aaPredicted RBP15.08■□□□□ 0
SNX4-204ENST00000473417 GPM6AP51674 278 aa15.08■□□□□ 0
SNX4-204ENST00000473417 GTF2A1P52655 376 aaPredicted RBP15.08■□□□□ 0
SNX4-204ENST00000473417 SEC61A1P61619 476 aaKnown RBP15.08■□□□□ 0
SNX4-204ENST00000473417 CLVS2Q5SYC1 327 aa15.08■□□□□ 0
SNX4-204ENST00000473417 C6orf141Q5SZD1 244 aa15.08■□□□□ 0
SNX4-204ENST00000473417 SFRP4Q6FHJ7 346 aaPredicted RBP15.08■□□□□ 0
SNX4-204ENST00000473417 TMPRSS11AQ6ZMR5 421 aa15.08■□□□□ 0
SNX4-204ENST00000473417 STX19Q8N4C7 294 aa15.08■□□□□ 0
SNX4-204ENST00000473417 ZNF676Q8N7Q3 588 aa15.08■□□□□ 0
SNX4-204ENST00000473417 DEFB108BQ8NET1 73 aa15.08■□□□□ 0
SNX4-204ENST00000473417 RPL3LQ92901 407 aaKnown RBP15.08■□□□□ 0
SNX4-204ENST00000473417 CAB39Q9Y376 341 aaPredicted RBP15.08■□□□□ 0
SNX4-204ENST00000473417 TMEM210A6NLX4 147 aa15.07■□□□□ 0
SNX4-204ENST00000473417 DHRS7CA6NNS2 312 aa15.07■□□□□ 0
SNX4-204ENST00000473417 ISG15P05161 165 aa15.07■□□□□ 0
SNX4-204ENST00000473417 MYF6P23409 242 aa15.07■□□□□ 0
SNX4-204ENST00000473417 CD80P33681 288 aa15.07■□□□□ 0
SNX4-204ENST00000473417 VHLP40337 213 aa15.07■□□□□ 0
SNX4-204ENST00000473417 HSPA13P48723 471 aa15.07■□□□□ 0
SNX4-204ENST00000473417 GNG3P63215 75 aa15.07■□□□□ 0
SNX4-204ENST00000473417 MRPL28Q13084 256 aaKnown RBP15.07■□□□□ 0
SNX4-204ENST00000473417 MED21Q13503 144 aa15.07■□□□□ 0
SNX4-204ENST00000473417 TMEM42Q69YG0 159 aa15.07■□□□□ 0
SNX4-204ENST00000473417 MUC20Q8N307 709 aaPredicted RBP15.07■□□□□ 0
SNX4-204ENST00000473417 GCSAMQ8N6F7 178 aa15.07■□□□□ 0
SNX4-204ENST00000473417 CCDC54Q8NEL0 328 aa15.07■□□□□ 0
SNX4-204ENST00000473417 OR5A2Q8NGI9 324 aa15.07■□□□□ 0
SNX4-204ENST00000473417 OR10AC1Q8NH08 325 aa15.07■□□□□ 0
SNX4-204ENST00000473417 LRRC29Q8WV35 223 aa15.07■□□□□ 0
SNX4-204ENST00000473417 ANKRD60Q9BZ19 345 aa15.07■□□□□ 0
SNX4-204ENST00000473417 TLNRD1Q9H1K6 362 aa15.07■□□□□ 0
SNX4-204ENST00000473417 ANKRD61A6NGH8 418 aa15.06■□□□□ 0
SNX4-204ENST00000473417 CEACAM18A8MTB9 384 aa15.06■□□□□ 0
SNX4-204ENST00000473417 PTGES3LE9PB15 166 aa15.06■□□□□ 0
SNX4-204ENST00000473417 C3orf80F5H4A9 247 aa15.06■□□□□ 0
SNX4-204ENST00000473417 TRAPPC2LH3BP13 241 aa15.06■□□□□ 0
SNX4-204ENST00000473417 SLC1A7O00341 560 aa15.06■□□□□ 0
SNX4-204ENST00000473417 ZNF12P17014 697 aa15.06■□□□□ 0
SNX4-204ENST00000473417 EGR1P18146 543 aa15.06■□□□□ 0
SNX4-204ENST00000473417 C21orf33P30042 268 aaPredicted RBP15.06■□□□□ 0
SNX4-204ENST00000473417 FAM76BQ5HYJ3 339 aa15.06■□□□□ 0
SNX4-204ENST00000473417 XAF1Q6GPH4 301 aa15.06■□□□□ 0
SNX4-204ENST00000473417 WDR82Q6UXN9 313 aa15.06■□□□□ 0
SNX4-204ENST00000473417 SCCPDHQ8NBX0 429 aa15.06■□□□□ 0
SNX4-204ENST00000473417 GATAD2BQ8WXI9 593 aa15.06■□□□□ 0
SNX4-204ENST00000473417 JMJD8Q96S16 334 aa15.06■□□□□ 0
SNX4-204ENST00000473417 SLC6A7Q99884 636 aa15.06■□□□□ 0
SNX4-204ENST00000473417 TMEM246Q9BRR3 403 aa15.06■□□□□ 0
SNX4-204ENST00000473417 SUCNR1Q9BXA5 334 aa15.06■□□□□ 0
SNX4-204ENST00000473417 OR51I2Q9H344 312 aa15.06■□□□□ 0
SNX4-204ENST00000473417 MMP26Q9NRE1 261 aa15.06■□□□□ 0
SNX4-204ENST00000473417 ERVK-18Q9QC07 812 aa15.06■□□□□ 0
SNX4-204ENST00000473417 HHLA2Q9UM44 414 aa15.06■□□□□ 0
SNX4-204ENST00000473417 TRBV2A0A0J9YWF9 115 aa15.05■□□□□ -0
SNX4-204ENST00000473417 OR5B21A6NL26 309 aa15.05■□□□□ -0
SNX4-204ENST00000473417 LGALS8O00214 317 aa15.05■□□□□ -0
SNX4-204ENST00000473417 ZFPL1O95159 310 aa15.05■□□□□ -0
SNX4-204ENST00000473417 CCDC159P0C7I6 412 aa15.05■□□□□ -0
SNX4-204ENST00000473417 TGM4P49221 684 aa15.05■□□□□ -0
SNX4-204ENST00000473417 ZNF404Q494X3 552 aa15.05■□□□□ -0
SNX4-204ENST00000473417 ESCO2Q56NI9 601 aa15.05■□□□□ -0
SNX4-204ENST00000473417 OR51A4Q8NGJ6 313 aa15.05■□□□□ -0
SNX4-204ENST00000473417 OR5AK2Q8NH90 309 aa15.05■□□□□ -0
SNX4-204ENST00000473417 TRMT10AQ8TBZ6 339 aaKnown RBP15.05■□□□□ -0
SNX4-204ENST00000473417 HAVCR2Q8TDQ0 301 aa15.05■□□□□ -0
SNX4-204ENST00000473417 NPRL2Q8WTW4 380 aa15.05■□□□□ -0
SNX4-204ENST00000473417 FAM216AQ8WUB2 273 aa15.05■□□□□ -0
SNX4-204ENST00000473417 FGGYQ96C11 551 aa15.05■□□□□ -0
SNX4-204ENST00000473417 ADAT3Q96EY9 351 aaPredicted RBP15.05■□□□□ -0
SNX4-204ENST00000473417 CNBD2Q96M20 576 aa15.05■□□□□ -0
SNX4-204ENST00000473417 PDCD1LG2Q9BQ51 273 aa15.05■□□□□ -0
SNX4-204ENST00000473417 COMMD4Q9H0A8 199 aa15.05■□□□□ -0
SNX4-204ENST00000473417 FKBP14Q9NWM8 211 aa15.05■□□□□ -0
SNX4-204ENST00000473417 BABAM2Q9NXR7 383 aa15.05■□□□□ -0
SNX4-204ENST00000473417 SCN3BQ9NY72 215 aa15.05■□□□□ -0
SNX4-204ENST00000473417 LRCH1Q9Y2L9 728 aa15.05■□□□□ -0
SNX4-204ENST00000473417 INSIG2Q9Y5U4 225 aa15.05■□□□□ -0
SNX4-204ENST00000473417 IGHV3OR15-7A0A075B7D8 119 aa15.04■□□□□ -0
SNX4-204ENST00000473417 OOEPA6NGQ2 149 aa15.04■□□□□ -0
SNX4-204ENST00000473417 TMEM212A6NML5 194 aa15.04■□□□□ -0
SNX4-204ENST00000473417 TRIM77I1YAP6 450 aa15.04■□□□□ -0
SNX4-204ENST00000473417 FSTL3O95633 263 aa15.04■□□□□ -0
SNX4-204ENST00000473417 SERPINA3P01011 423 aa15.04■□□□□ -0
SNX4-204ENST00000473417 LHBP01229 141 aa15.04■□□□□ -0
SNX4-204ENST00000473417 GMFBP60983 142 aa15.04■□□□□ -0
SNX4-204ENST00000473417 UBE2V2Q15819 145 aa15.04■□□□□ -0
SNX4-204ENST00000473417 TUSC1Q2TAM9 212 aa15.04■□□□□ -0
SNX4-204ENST00000473417 RPL22L1Q6P5R6 122 aaKnown RBP15.04■□□□□ -0
SNX4-204ENST00000473417 HAGHLQ6PII5 290 aaPredicted RBP15.04■□□□□ -0
SNX4-204ENST00000473417 C12orf54Q6X4T0 127 aa15.04■□□□□ -0
SNX4-204ENST00000473417 BPIFB2Q8N4F0 458 aa15.04■□□□□ -0
SNX4-204ENST00000473417 OR13C3Q8NGS6 347 aa15.04■□□□□ -0
SNX4-204ENST00000473417 OR52N1Q8NH53 320 aa15.04■□□□□ -0
SNX4-204ENST00000473417 CHST5Q9GZS9 411 aa15.04■□□□□ -0
SNX4-204ENST00000473417 ESM1Q9NQ30 184 aa15.04■□□□□ -0
SNX4-204ENST00000473417 RAB26Q9ULW5 256 aa15.04■□□□□ -0
SNX4-204ENST00000473417 SIRT4Q9Y6E7 314 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms