RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 IL13RA1P78552 427 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 EFNB1P98172 346 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 SMIM21Q3B7S5 101 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 LCE2DQ5TA82 110 aaPredicted RBP9.57□□□□□ -0.88
CPNE1-222ENST00000473373 BRD3OSQ6XYD6 125 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 ZNF841Q6ZN19 808 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 ZNF573Q86YE8 665 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 C11orf53Q8IXP5 236 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 BCL6BQ8N143 479 aaPredicted RBP9.57□□□□□ -0.88
CPNE1-222ENST00000473373 ZFAND2BQ8WV99 257 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 UBE2FQ969M7 185 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 UPRTQ96BW1 309 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 Q96MT0 163 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 WDR13Q9H1Z4 485 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 TNFRSF19Q9NS68 423 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 NLKQ9UBE8 527 aa9.57□□□□□ -0.88
CPNE1-222ENST00000473373 SLC25A10Q9UBX3 287 aaPredicted RBP9.57□□□□□ -0.88
CPNE1-222ENST00000473373 ANKRD61A6NGH8 418 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 OR2AT4A6NND4 320 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 J3QLW9 94 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 DLGAP1O14490 977 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 RHBDL1O75783 438 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 INMTO95050 263 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 CYB5AP00167 134 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 PLATP00750 562 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 SFTPBP07988 381 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 UBCP0CG48 685 aaKnown RBP9.56□□□□□ -0.88
CPNE1-222ENST00000473373 PPIAL4GP0DN37 164 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 ZNF19P17023 458 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 CFHR2P36980 270 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 ACTA2P62736 377 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 ACTG2P63267 376 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 BLMHQ13867 455 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 PDCD1Q15116 288 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 CNN3Q15417 329 aaKnown RBP9.56□□□□□ -0.88
CPNE1-222ENST00000473373 ZSCAN26Q16670 478 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 KLF17Q5JT82 389 aaPredicted RBP9.56□□□□□ -0.88
CPNE1-222ENST00000473373 CATSPERDQ86XM0 798 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 PDZD9Q8IXQ8 264 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 BATF2Q8N1L9 274 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 C3orf56Q8N813 242 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 GATAD2BQ8WXI9 593 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 LHX4Q969G2 390 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 SLC25A28Q96A46 364 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 WDFY2Q96P53 400 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 TLNRD1Q9H1K6 362 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 CNTD2Q9H8S5 307 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 ACOXLQ9NUZ1 547 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 KAAG1Q9UBP8 84 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 OR14J1Q9UGF5 321 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 V9GYS6 101 aa9.56□□□□□ -0.88
CPNE1-222ENST00000473373 SVEP1Q4LDE5 3571 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 LOC100130705A0A1B0GUX0 176 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 A0A1B0GW55 424 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 LOC107986453A0A1B0GWG9 222 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DNAJC9-AS1A6NH13 148 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 J3QT63 122 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 SLC1A7O00341 560 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 GPR37O15354 613 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 FSHBP01225 129 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 CRYBA1P05813 215 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DUX4L2P0CJ85 424 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DUX4L3P0CJ86 424 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DUX4L4P0CJ87 422 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DUX4L5P0CJ88 424 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DUX4L6P0CJ89 424 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DUX4L7P0CJ90 424 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 SNRPGP62308 76 aaKnown RBP9.55□□□□□ -0.88
CPNE1-222ENST00000473373 UBA52P62987 128 aaKnown RBP9.55□□□□□ -0.88
CPNE1-222ENST00000473373 ELF3P78545 371 aaPredicted RBP9.55□□□□□ -0.88
CPNE1-222ENST00000473373 PAX2Q02962 417 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 OCLNQ16625 522 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 LRRC36Q1X8D7 754 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 TMEM244Q5VVB8 128 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 RUSC1-AS1Q66K80 236 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 STUMQ69YW2 141 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DUX4L9Q6RFH8 374 aaPredicted RBP9.55□□□□□ -0.88
CPNE1-222ENST00000473373 FAM185AQ8N0U4 392 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 ACBD7Q8N6N7 88 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 CCDC54Q8NEL0 328 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 OR14K1Q8NGZ2 314 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 FAM216AQ8WUB2 273 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 CYGBQ8WWM9 190 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 AQP3Q92482 292 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 RORBQ92753 470 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 BORCS8Q96FH0 119 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DNTTIP1Q9H147 329 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 OR51I2Q9H344 312 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 ZMAT3Q9HA38 289 aaKnown RBP9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DUX4Q9UBX2 424 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 AASSQ9UDR5 926 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 RPUSD1Q9UJJ7 312 aaKnown RBP9.55□□□□□ -0.88
CPNE1-222ENST00000473373 FAM96BQ9Y3D0 163 aa9.55□□□□□ -0.88
CPNE1-222ENST00000473373 DHRS7CA6NNS2 312 aa9.54□□□□□ -0.88
CPNE1-222ENST00000473373 SRSF10O75494 262 aaKnown RBP9.54□□□□□ -0.88
CPNE1-222ENST00000473373 FADS2O95864 444 aaKnown RBP9.54□□□□□ -0.88
CPNE1-222ENST00000473373 TFF1P04155 84 aa9.54□□□□□ -0.88
CPNE1-222ENST00000473373 SELLP14151 372 aa9.54□□□□□ -0.88
CPNE1-222ENST00000473373 PRTN3P24158 256 aa9.54□□□□□ -0.88
CPNE1-222ENST00000473373 EEF1B2P24534 225 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms