RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 IFITM3Q01628 133 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 MZT1Q08AG7 82 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 ARL6IP1Q15041 203 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 BAK1Q16611 211 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 SPATA46Q5T0L3 261 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 CRIP3Q6Q6R5 217 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 FJX1Q86VR8 437 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 ZNF573Q86YE8 665 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 SPERTQ8NA61 448 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 OR56B1Q8NGI3 324 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 CHPT1Q8WUD6 406 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 OR5P3Q8WZ94 311 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 CCDC120Q96HB5 630 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 C1orf147Q96MC9 270 aaPredicted RBP11□□□□□ -0.65
VPS13D-205ENST00000473099 ABHD1Q96SE0 405 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 RTL8AQ9BWD3 113 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 C14orf119Q9NWQ9 140 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 NKIRAS2Q9NYR9 191 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 NDRG3Q9UGV2 375 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 GPR160Q9UJ42 338 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 PURGQ9UJV8 347 aaKnown RBP11□□□□□ -0.65
VPS13D-205ENST00000473099 ING4Q9UNL4 249 aa11□□□□□ -0.65
VPS13D-205ENST00000473099 A0A1W2PQ09 198 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 TMEM210A6NLX4 147 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 J3QKU1 62 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 CDC14BO60729 498 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 CRTAPO75718 401 aaPredicted RBP10.99□□□□□ -0.65
VPS13D-205ENST00000473099 CSTBP04080 98 aaKnown RBP10.99□□□□□ -0.65
VPS13D-205ENST00000473099 PTH2RP49190 550 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 EFNB2P52799 333 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 PRSS12P56730 875 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 AP3S2P59780 193 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 SELENOVP59797 346 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 NKX6-1P78426 367 aaPredicted RBP10.99□□□□□ -0.65
VPS13D-205ENST00000473099 ADORA2A-AS1P86434 159 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 SSBP1Q04837 148 aaKnown RBP10.99□□□□□ -0.65
VPS13D-205ENST00000473099 PSG7Q13046 419 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 PDZK1IP1Q13113 114 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 SNTB2Q13425 540 aaKnown RBP10.99□□□□□ -0.65
VPS13D-205ENST00000473099 UNC119Q13432 240 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 ASAH1Q13510 395 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 RSU1Q15404 277 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 TRIM16LQ309B1 348 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 SLC22A6Q4U2R8 563 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 C4orf17Q53FE4 359 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 TMEM200AQ86VY9 491 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 MKXQ8IYA7 352 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 POC5Q8NA72 575 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 BHLHE23Q8NDY6 225 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 NUP37Q8NFH4 326 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 OR8G5Q8NG78 346 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 OR8S1Q8NH09 359 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 CA5BP1Q8WTZ4 195 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 HPSE2Q8WWQ2 592 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 FCAMRQ8WWV6 532 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 DEDD2Q8WXF8 326 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 RNF170Q96K19 258 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 NKX3-1Q99801 234 aaPredicted RBP10.99□□□□□ -0.65
VPS13D-205ENST00000473099 THAP7Q9BT49 309 aaPredicted RBP10.99□□□□□ -0.65
VPS13D-205ENST00000473099 SCPEP1Q9HB40 452 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 RHOFQ9HBH0 211 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 KCNJ16Q9NPI9 418 aa10.99□□□□□ -0.65
VPS13D-205ENST00000473099 ICE1Q9Y2F5 2266 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 IGKV1-27A0A075B6S5 117 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 TRAV18A0A075B6X5 111 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 VSTM5A8MXK1 200 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 ZNF732B4DXR9 585 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 PRSS44E7EML9 344 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 H3BUI4 141 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 TIMM8AO60220 97 aaPredicted RBP10.98□□□□□ -0.65
VPS13D-205ENST00000473099 MPIG6BO95866 241 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 ECDO95905 644 aaPredicted RBP10.98□□□□□ -0.65
VPS13D-205ENST00000473099 GSTT2BP0CG30 244 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 GTF2F2P13984 249 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 ZNF250P15622 560 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 MGMTP16455 207 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 AGAP20933 346 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 CPT2P23786 658 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 RPS27AP62979 156 aaKnown RBP10.98□□□□□ -0.65
VPS13D-205ENST00000473099 MZT2BQ6NZ67 158 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 WFDC8Q8IUA0 241 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 SNX29P2Q8IUI4 249 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 ZNF808Q8N4W9 903 aaPredicted RBP10.98□□□□□ -0.65
VPS13D-205ENST00000473099 ZNF611Q8N823 705 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 OR5D18Q8NGL1 313 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 C7orf50Q9BRJ6 194 aaKnown RBP10.98□□□□□ -0.65
VPS13D-205ENST00000473099 ADAT1Q9BUB4 502 aaKnown RBP10.98□□□□□ -0.65
VPS13D-205ENST00000473099 TM2D1Q9BX74 207 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 PKIBQ9C010 78 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 LPAR5Q9H1C0 372 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 KCNK15Q9H427 330 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 ESRP2Q9H6T0 727 aaKnown RBP10.98□□□□□ -0.65
VPS13D-205ENST00000473099 ELL3Q9HB65 397 aaPredicted RBP10.98□□□□□ -0.65
VPS13D-205ENST00000473099 TMEM100Q9NV29 134 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 TAS2R8Q9NYW2 309 aa10.98□□□□□ -0.65
VPS13D-205ENST00000473099 A0A1B0GWJ7 208 aa10.97□□□□□ -0.65
VPS13D-205ENST00000473099 LRP5LA4QPB2 252 aa10.97□□□□□ -0.65
VPS13D-205ENST00000473099 FAM90A27PA6NNH2 459 aa10.97□□□□□ -0.65
VPS13D-205ENST00000473099 CENPXA8MT69 81 aa10.97□□□□□ -0.65
VPS13D-205ENST00000473099 B8ZZF3 427 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms