RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 IGKV1D-17A0A075B6S4 117 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 OR5B21A6NL26 309 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 DYNC1I1O14576 645 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 PSG2P11465 335 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 SRSF4Q08170 494 aaKnown RBP12.54□□□□□ -0.4
VTI1A-203ENST00000472892 CEP78Q5JTW2 689 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 MEPCEQ7L2J0 689 aaKnown RBP12.54□□□□□ -0.4
VTI1A-203ENST00000472892 THAP5Q7Z6K1 395 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 OR5K1Q8NHB7 308 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 AQP3Q92482 292 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 CITED1Q99966 193 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 CADM1Q9BY67 442 aaKnown RBP12.54□□□□□ -0.4
VTI1A-203ENST00000472892 RASL12Q9NYN1 266 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 ZNF222Q9UK12 451 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 MAB21L2Q9Y586 359 aa12.54□□□□□ -0.4
VTI1A-203ENST00000472892 M0R1W7 72 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 NPFFO15130 113 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 SRSF10O75494 262 aaKnown RBP12.53□□□□□ -0.4
VTI1A-203ENST00000472892 FBP1P09467 338 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 NDUFB7P17568 137 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 EEF1B2P24534 225 aaKnown RBP12.53□□□□□ -0.4
VTI1A-203ENST00000472892 RIDAP52758 137 aaKnown RBP12.53□□□□□ -0.4
VTI1A-203ENST00000472892 DLX1P56177 255 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 PRB3Q04118 309 aaPredicted RBP12.53□□□□□ -0.4
VTI1A-203ENST00000472892 TAF9Q16594 264 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 OCLNQ16625 522 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 ZNF829Q3KNS6 432 aaPredicted RBP12.53□□□□□ -0.4
VTI1A-203ENST00000472892 DMRTC1Q5HYR2 192 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 AADACL4Q5VUY2 407 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 MOB3CQ70IA8 216 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 BCDIN3DQ7Z5W3 292 aaKnown RBP12.53□□□□□ -0.4
VTI1A-203ENST00000472892 ZSCAN4Q8NAM6 433 aaPredicted RBP12.53□□□□□ -0.4
VTI1A-203ENST00000472892 LINC01006Q8NI28 216 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 SDSLQ96GA7 329 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 CNN2Q99439 309 aaKnown RBP12.53□□□□□ -0.4
VTI1A-203ENST00000472892 MNTQ99583 582 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 PRRG3Q9BZD7 231 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 SEMA6AQ9H2E6 1030 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 ZNRD1Q9P1U0 126 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 ENPP5Q9UJA9 477 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 PIGLQ9Y2B2 252 aa12.53□□□□□ -0.4
VTI1A-203ENST00000472892 SLC22A31A6NKX4 558 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 KCNAB3O43448 404 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 MITFO75030 526 aaPredicted RBP12.52□□□□□ -0.41
VTI1A-203ENST00000472892 DHRS3O75911 302 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 NRASP01111 189 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 TTRP02766 147 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 FAHP16930 419 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 EPHA2P29317 976 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 GABRA2P47869 451 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 UBE2E1P51965 193 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 MFGE8Q08431 387 aaPredicted RBP12.52□□□□□ -0.41
VTI1A-203ENST00000472892 SLX4IPQ5VYV7 408 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 NXNL2Q5VZ03 156 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 NCR3LG1Q68D85 454 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 TMEM42Q69YG0 159 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 HAGHLQ6PII5 290 aaPredicted RBP12.52□□□□□ -0.41
VTI1A-203ENST00000472892 ZNF322Q6U7Q0 402 aaPredicted RBP12.52□□□□□ -0.41
VTI1A-203ENST00000472892 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 COMMD2Q86X83 199 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 ZNRF1Q8ND25 227 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 LRTOMTQ8WZ04 291 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 DUS3LQ96G46 650 aaKnown RBP12.52□□□□□ -0.41
VTI1A-203ENST00000472892 APOL4Q9BPW4 351 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 METTL8Q9H825 291 aaKnown RBP12.52□□□□□ -0.41
VTI1A-203ENST00000472892 ADGRL4Q9HBW9 690 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 KRT84Q9NSB2 600 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 H2AFY2Q9P0M6 372 aaPredicted RBP12.52□□□□□ -0.41
VTI1A-203ENST00000472892 IKZF2Q9UKS7 526 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 RNF114Q9Y508 228 aa12.52□□□□□ -0.41
VTI1A-203ENST00000472892 TRBV23-1A0A0A0MS06 115 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 A0A1W2PQ09 198 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 ZAR1LA6NP61 321 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 G3V2T6 193 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 MTRF1O75570 445 aaKnown RBP12.51□□□□□ -0.41
VTI1A-203ENST00000472892 CLPXO76031 633 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 PROK1P58294 105 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 KRTAP10-3P60369 221 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 CXCR4P61073 352 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 ACTR3P61158 418 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 ACSM1Q08AH1 577 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 BNIP1Q12981 228 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 KLRD1Q13241 179 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 BLMHQ13867 455 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 ATP6AP1Q15904 470 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 PLCXD3Q63HM9 321 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 C12orf73Q69YU5 71 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 KDM4DQ6B0I6 523 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 Q6ZSR3 168 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 SLC35F2Q8IXU6 374 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 ELMOD2Q8IZ81 293 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 PNKDQ8N490 385 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 TCEANCQ8N8B7 351 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 POC1AQ8NBT0 407 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 TMEM163Q8TC26 289 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 TTTY10Q9BZA0 68 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 C16orf95Q9H693 158 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 CLN6Q9NWW5 311 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 VPREB3Q9UKI3 123 aa12.51□□□□□ -0.41
VTI1A-203ENST00000472892 R4GMQ9 66 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms