RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 OR52N1Q8NH53 320 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 NAP1L5Q96NT1 182 aaPredicted RBP2.54□□□□□ -2
PRPF40A-208ENST00000472760 TSNAXQ99598 290 aaKnown RBP2.54□□□□□ -2
PRPF40A-208ENST00000472760 TDRD3Q9H7E2 651 aaKnown RBP2.54□□□□□ -2
PRPF40A-208ENST00000472760 LINC00574Q9H8X3 128 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 RWDD2AQ9UIY3 292 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 CFL2Q9Y281 166 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 KLF12Q9Y4X4 402 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 DOCK8Q8NF50 2099 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 J3QT63 122 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 TRAPPC6AO75865 159 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 STAG3L2P0CL84 134 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 TAS2R60P59551 318 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 GRB2P62993 217 aaKnown RBP2.53□□□□□ -2
PRPF40A-208ENST00000472760 STK38Q15208 465 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 PDPNQ86YL7 162 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 SGPP2Q8IWX5 399 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 RNF10Q8N5U6 811 aaKnown RBP2.53□□□□□ -2
PRPF40A-208ENST00000472760 PHF10Q8WUB8 498 aaKnown RBP2.53□□□□□ -2
PRPF40A-208ENST00000472760 HGDQ93099 445 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 TOP1MTQ969P6 601 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 FAM131CQ96AQ9 280 aa2.53□□□□□ -2
PRPF40A-208ENST00000472760 COL27A1Q8IZC6 1860 aaPredicted RBP2.53□□□□□ -2
PRPF40A-208ENST00000472760 ADGRL1O94910 1474 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 KIF27Q86VH2 1401 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 TMEM72A0PK05 275 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 SNAI1O95863 264 aaPredicted RBP2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 IGLV7-43P04211 117 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 CRYGCP07315 174 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 GZMAP12544 262 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 GNRHRP30968 328 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 LAMTOR4Q0VGL1 99 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 TRDNQ13061 729 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 IL15RAQ13261 267 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 DUPD1Q68J44 220 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 TBPL2Q6SJ96 375 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 ZCCHC24Q8N2G6 241 aaKnown RBP2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 ZNF680Q8NEM1 530 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 SLC26A10Q8NG04 563 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 OR51A7Q8NH64 312 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 ZFAND1Q8TCF1 268 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 CENPNQ96H22 339 aaPredicted RBP2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 RNF170Q96K19 258 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 PDCD1LG2Q9BQ51 273 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 GAL3ST2Q9H3Q3 398 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 CA10Q9NS85 328 aa2.52□□□□□ -2.01
PRPF40A-208ENST00000472760 AQRO60306 1485 aaKnown RBP eCLIP2.52□□□□□ -2.011e-7■□□□□ 10.1
PRPF40A-208ENST00000472760 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 SCN1AP35498 2009 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 IGKV1-6A0A0C4DH72 117 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 OR6C70A6NIJ9 312 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 NDUFS5O43920 106 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 OTCP00480 354 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 IGKV1-39P01597 117 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 IGKV1D-39P04432 117 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 MLF1P58340 268 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 RPS11P62280 158 aaKnown RBP eCLIP2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 RPL31P62899 125 aaKnown RBP2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 IFFO1Q0D2I5 559 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 IGFBP7Q16270 282 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 SP6Q3SY56 376 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 NKAIN1Q4KMZ8 207 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 TTC32Q5I0X7 151 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 FAM27D1Q5T7N8 215 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 MORN3Q6PF18 240 aaPredicted RBP2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 DAZ4Q86SG3 579 aaKnown RBP2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 C1orf64Q8NEQ6 169 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 OR2M7Q8NG81 312 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 OR4A15Q8NGL6 344 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 ZNF420Q8TAQ5 688 aaPredicted RBP2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 NDNFQ8TB73 568 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 YIPF6Q96EC8 236 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 SEC22CQ9BRL7 303 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 DAZ1Q9NQZ3 744 aaKnown RBP2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 ORC6Q9Y5N6 252 aa2.51□□□□□ -2.01
PRPF40A-208ENST00000472760 A0A0J9YYE9 177 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 FAM240AA0A1B0GVK7 77 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 ZNF233A6NK53 670 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 SEC14L6B5MCN3 397 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 TRBC1P01850 177 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 RHOCP08134 193 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 OR5AL1P0C617 328 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 HLA-GP17693 338 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 CD9P21926 228 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 PAX6P26367 422 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 TGFBR1P36897 503 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 PRKCDQ05655 676 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 ATP5G2Q06055 141 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 FBXL19-AS1Q494R0 122 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 EPGNQ6UW88 154 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 ASCL4Q6XD76 172 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 LINC00304Q8N9R0 145 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 ORAOV1Q8WV07 137 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 CHID1Q9BWS9 393 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 MS4A8Q9BY19 250 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 API5Q9BZZ5 524 aaKnown RBP2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 LHX5Q9H2C1 402 aa2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 STX18Q9P2W9 335 aaKnown RBP2.5□□□□□ -2.01
PRPF40A-208ENST00000472760 HMGXB4Q9UGU5 601 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms