RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 A0A0X1KG70 313 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 A6NIN4 97 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 SRRM5B3KS81 715 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 PTGES3LE9PB15 166 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 E9PI62 339 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 F5H0A9 414 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-211ENST00000472490 H3BSH0 61 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 SLC1A7O00341 560 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 PLPP2O43688 288 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 CRLF1O75462 422 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 PRKACBP22694 351 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 HAAOP46952 286 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 NPY4RP50391 375 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 FUT6P51993 359 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 GNB2P62879 340 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 HNRNPA0Q13151 305 aaKnown RBP11.89□□□□□ -0.51
BRCA1-211ENST00000472490 CDK5R1Q15078 307 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 CHRFAM7AQ494W8 412 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 TEX36Q5VZQ5 186 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 HAGHLQ6PII5 290 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-211ENST00000472490 UTS2BQ765I0 119 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 SERPINA12Q8IW75 414 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 DNAAF1Q8NEP3 725 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 OR4M2Q8NGB6 313 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 OR5D14Q8NGL3 314 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 GATAD2BQ8WXI9 593 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 SPSB1Q96BD6 273 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 FGGYQ96C11 551 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 BORCS8Q96FH0 119 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 SSBP3Q9BWW4 388 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-211ENST00000472490 BEX2Q9BXY8 128 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 FKBP14Q9NWM8 211 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 RASL12Q9NYN1 266 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 DNAJB11Q9UBS4 358 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 CLEC2DQ9UHP7 191 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 DHDHQ9UQ10 334 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 PCDHGB5Q9Y5G0 923 aa11.89□□□□□ -0.51
BRCA1-211ENST00000472490 MED13LQ71F56 2210 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 FAM230AA0A1W2PPH8 454 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 PQLC2LA1A4F0 135 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 A8MXK9 166 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 J3QLI3 93 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 J3QT63 122 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 CDK1P06493 297 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 CD2P06729 351 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 C21orf33P30042 268 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-211ENST00000472490 CD80P33681 288 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 RBMXP38159 391 aaKnown RBP11.88□□□□□ -0.51
BRCA1-211ENST00000472490 RBP2P50120 134 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 GTF2A1P52655 376 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-211ENST00000472490 WNT4P56705 351 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 LCN2P80188 198 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 UBE2V2Q15819 145 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 DCAF12L2Q5VW00 463 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 RNLSQ5VYX0 342 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 SLC36A1Q7Z2H8 476 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 GPR148Q8TDV2 347 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 TSEN15Q8WW01 171 aaKnown RBP11.88□□□□□ -0.51
BRCA1-211ENST00000472490 AQP3Q92482 292 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 SMIM19Q96E16 107 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 ADAT3Q96EY9 351 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-211ENST00000472490 CNBD2Q96M20 576 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 ZNF184Q99676 751 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-211ENST00000472490 PDCD1LG2Q9BQ51 273 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 MND1Q9BWT6 205 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 FGF23Q9GZV9 251 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-211ENST00000472490 METTL17Q9H7H0 456 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-211ENST00000472490 CLN8Q9UBY8 286 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 OR5V1Q9UGF6 321 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 BLOC1S6Q9UL45 172 aa11.88□□□□□ -0.51
BRCA1-211ENST00000472490 POLR3KQ9Y2Y1 108 aaPredicted RBP11.88□□□□□ -0.51
BRCA1-211ENST00000472490 TMPRSS2O15393 492 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 OGG1O15527 345 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 AKR7A2O43488 359 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 ADAM20O43506 726 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 RRP9O43818 475 aaKnown RBP11.87□□□□□ -0.51
BRCA1-211ENST00000472490 GLRA1P23415 457 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 PITPNBP48739 271 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 ATP1B3P54709 279 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 CR1LQ2VPA4 569 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 C11orf91Q3C1V1 193 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 DMRTC1Q5HYR2 192 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 FAM120AOSQ5T036 256 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 CD276Q5ZPR3 534 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 FAHD2BQ6P2I3 314 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-211ENST00000472490 FAM90A1Q86YD7 464 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 C19orf18Q8NEA5 215 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 OR51A4Q8NGJ6 313 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 TRMT10AQ8TBZ6 339 aaKnown RBP11.87□□□□□ -0.51
BRCA1-211ENST00000472490 RPS4Y2Q8TD47 263 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 TMIGD2Q96BF3 282 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 CPNE2Q96FN4 548 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-211ENST00000472490 FAHD2AQ96GK7 314 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 CDCA4Q9BXL8 241 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 PKIBQ9C010 78 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 DNTTIP1Q9H147 329 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 RASSF4Q9H2L5 321 aa11.87□□□□□ -0.51
BRCA1-211ENST00000472490 NKX6-3A6NJ46 265 aa11.86□□□□□ -0.51
BRCA1-211ENST00000472490 MAGEB3O15480 346 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms