RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PIGLQ9Y2B2 252 aa7.43□□□□□ -1.22
USF1-204ENST00000472217 IGKV1D-17A0A075B6S4 117 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 OR2AT4A6NND4 320 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 ZNF670-ZNF695F2Z2N8 137 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 SIGLEC5O15389 551 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 DHRS3O75911 302 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 ACAA1P09110 424 aaPredicted RBP7.42□□□□□ -1.22
USF1-204ENST00000472217 FCGR1AP12314 374 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 GLRA1P23415 457 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 POLR2IP36954 125 aaKnown RBP7.42□□□□□ -1.22
USF1-204ENST00000472217 DLX1P56177 255 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 PRB3Q04118 309 aaPredicted RBP7.42□□□□□ -1.22
USF1-204ENST00000472217 DGUOKQ16854 277 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 BCL2L15Q5TBC7 163 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 HAGHLQ6PII5 290 aaPredicted RBP7.42□□□□□ -1.22
USF1-204ENST00000472217 METAP1DQ6UB28 335 aaPredicted RBP7.42□□□□□ -1.22
USF1-204ENST00000472217 FIP1L1Q6UN15 594 aaKnown RBP7.42□□□□□ -1.22
USF1-204ENST00000472217 MOB3CQ70IA8 216 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 SSX6Q7RTT6 188 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 LDLRAD3Q86YD5 345 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 GID4Q8IVV7 300 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 ELMOD2Q8IZ81 293 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 CMTM4Q8IZR5 234 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 TMEM86BQ8N661 226 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 Q8N7P7 452 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 OR51G2Q8NGK0 314 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 SSMEM1Q8WWF3 244 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 MED30Q96HR3 178 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 MNTQ99583 582 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 SEMA6AQ9H2E6 1030 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 MOB1AQ9H8S9 216 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 SIRT7Q9NRC8 400 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 SLC25A10Q9UBX3 287 aaPredicted RBP7.42□□□□□ -1.22
USF1-204ENST00000472217 MRM2Q9UI43 246 aaKnown RBP7.42□□□□□ -1.22
USF1-204ENST00000472217 ENPP5Q9UJA9 477 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 ZNF222Q9UK12 451 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 OAZ3Q9UMX2 235 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 POMT1Q9Y6A1 747 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 R4GMQ9 66 aa7.42□□□□□ -1.22
USF1-204ENST00000472217 A0A1B0GTI1 187 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 SAC3D1A6NKF1 404 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 POM121CA8CG34 1229 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 RNASEK-C17orf49H0YIS7 233 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 MTRF1O75570 445 aaKnown RBP7.41□□□□□ -1.22
USF1-204ENST00000472217 RPP14O95059 124 aaKnown RBP7.41□□□□□ -1.22
USF1-204ENST00000472217 APOL3O95236 402 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 NRASP01111 189 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 IGHV4-59P01825 116 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 PSG2P11465 335 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 NDUFB7P17568 137 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 GABRA2P47869 451 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 CAV3P56539 151 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 ACTR3P61158 418 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 RELBQ01201 579 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 EGR3Q06889 387 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 KLRD1Q13241 179 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 CLVS2Q5SYC1 327 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 ZNF684Q5T5D7 378 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 TMEM42Q69YG0 159 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 POC1AQ8NBT0 407 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 ZNRF1Q8ND25 227 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 TMEM185AQ8NFB2 350 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 OR14K1Q8NGZ2 314 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 ZNF671Q8TAW3 534 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 ZNF488Q96MN9 340 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 TBX5Q99593 518 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 GABARAPL3Q9BY60 117 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 RIBC2Q9H4K1 309 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 ELL3Q9HB65 397 aaPredicted RBP7.41□□□□□ -1.22
USF1-204ENST00000472217 GPR173Q9NS66 373 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 C1RLQ9NZP8 487 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 WARS2Q9UGM6 360 aaKnown RBP7.41□□□□□ -1.22
USF1-204ENST00000472217 OR52A1Q9UKL2 312 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 SLC22A13Q9Y226 551 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 MAB21L2Q9Y586 359 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 V9GYS6 101 aa7.41□□□□□ -1.22
USF1-204ENST00000472217 A0A1W2PQ09 198 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 A0A1W2PQL4 384 aaPredicted RBP7.4□□□□□ -1.22
USF1-204ENST00000472217 A0A1W2PRD5 423 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 A0A1W2PRF3 423 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 A0A1W2PRM7 423 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 PQLC2LA1A4F0 135 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 A6NIN4 97 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 J3QT63 122 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 DLGAP1O14490 977 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 SYNGR1O43759 233 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 GPR137BO60478 399 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 CIB2O75838 187 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 CRYBA1P05813 215 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 PGA5P0DJD9 388 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 CCL1P22362 96 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 HTR1FP30939 366 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 IER3P46695 156 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 HAAOP46952 286 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 RAG2P55895 527 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 GUCA2AQ02747 115 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 ODF4Q2M2E3 257 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 SMIM21Q3B7S5 101 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 PRR31Q5SQ13 230 aa7.4□□□□□ -1.22
USF1-204ENST00000472217 ACP7Q6ZNF0 438 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms