RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GPR173Q9NS66 373 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 MRM2Q9UI43 246 aaKnown RBP6.59□□□□□ -1.35
USP48-207ENST00000471752 PIGLQ9Y2B2 252 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 RNF114Q9Y508 228 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 KPTNQ9Y664 436 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 IGKV1-27A0A075B6S5 117 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 MEIOCA2RUB1 952 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 ARRDC5A6NEK1 342 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 RFPL4AA6NLU0 287 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 RFPL4AL1F8VTS6 287 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 NPFFO15130 113 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 SIGLEC5O15389 551 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 GSC2O15499 205 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 E2F6O75461 281 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 ECDO95905 644 aaPredicted RBP6.58□□□□□ -1.36
USP48-207ENST00000471752 TTRP02766 147 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 HMGN1P05114 100 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 CALCBP10092 127 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 CCL3L1P16619 93 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 SAA4P35542 130 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 PSMA6P60900 246 aaKnown RBP6.58□□□□□ -1.36
USP48-207ENST00000471752 KCNJ8Q15842 424 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 ODF4Q2M2E3 257 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 PDLIM3Q53GG5 364 aaPredicted RBP6.58□□□□□ -1.36
USP48-207ENST00000471752 LCE2AQ5TA79 106 aaPredicted RBP6.58□□□□□ -1.36
USP48-207ENST00000471752 AADACL4Q5VUY2 407 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 TMEM200BQ69YZ2 307 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 HAGHLQ6PII5 290 aaPredicted RBP6.58□□□□□ -1.36
USP48-207ENST00000471752 C1orf122Q6ZSJ8 110 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 KRT74Q7RTS7 529 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 LHFPL4Q7Z7J7 247 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 AMIGO2Q86SJ2 522 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 LDLRAD3Q86YD5 345 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 CALHM1Q8IU99 346 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 ZDHHC23Q8IYP9 409 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 TMEM86BQ8N661 226 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 TCEANCQ8N8B7 351 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 CSNK2A3Q8NEV1 391 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 OR10Z1Q8NGY1 313 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 OR4F5Q8NH21 305 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 C8orf46Q8TAG6 207 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 OR8B4Q96RC9 309 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 IL4I1Q96RQ9 567 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 RTL8AQ9BWD3 113 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 C1orf21Q9H246 121 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 OPA3Q9H6K4 179 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 NIPAL2Q9H841 368 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 SLC25A19Q9HC21 320 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 ZNRD1Q9P1U0 126 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 NLKQ9UBE8 527 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 DNAJB9Q9UBS3 223 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 SLC25A10Q9UBX3 287 aaPredicted RBP6.58□□□□□ -1.36
USP48-207ENST00000471752 AASSQ9UDR5 926 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 LAMP5Q9UJQ1 280 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 FOXJ3Q9UPW0 622 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 MPC1Q9Y5U8 109 aa6.58□□□□□ -1.36
USP48-207ENST00000471752 PRODHO43272 600 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 CHST1O43916 411 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 CLPXO76031 633 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 PRB2P02812 416 aaPredicted RBP6.57□□□□□ -1.36
USP48-207ENST00000471752 CRYBA1P05813 215 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 PAICSP22234 425 aaKnown RBP6.57□□□□□ -1.36
USP48-207ENST00000471752 GLRA1P23415 457 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 BMXP51813 675 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 BLVRAP53004 296 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 DLX6P56179 175 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 BPIFB3P59826 476 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 IL5RAQ01344 420 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 EGR3Q06889 387 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 FLOT2Q14254 428 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 HABP2Q14520 560 aaPredicted RBP6.57□□□□□ -1.36
USP48-207ENST00000471752 ZNF273Q14593 569 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 CEACAM21Q3KPI0 293 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 PLA1AQ53H76 456 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 FBLN7Q53RD9 439 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 LRRC10Q5BKY1 277 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 UTF1Q5T230 341 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 CRIP3Q6Q6R5 217 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 CCBE1Q6UXH8 406 aaPredicted RBP6.57□□□□□ -1.36
USP48-207ENST00000471752 ACP7Q6ZNF0 438 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 C17orf107Q6ZR85 190 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 Q6ZS46 218 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 ASRGL1Q7L266 308 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 SLC36A1Q7Z2H8 476 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 RDH10Q8IZV5 341 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 FAM185AQ8N0U4 392 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 LYG1Q8N1E2 194 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 TMEM185AQ8NFB2 350 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 OR14K1Q8NGZ2 314 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 TBC1D15Q8TC07 691 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 NPRL2Q8WTW4 380 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 DYRK2Q92630 601 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 TBX5Q99593 518 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 YIPF3Q9GZM5 350 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 PPA2Q9H2U2 334 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 ADGRL4Q9HBW9 690 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 IL36RNQ9UBH0 155 aa6.57□□□□□ -1.36
USP48-207ENST00000471752 NOP16Q9Y3C1 178 aaKnown RBP6.57□□□□□ -1.36
USP48-207ENST00000471752 FAM96BQ9Y3D0 163 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms