RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SLC1A7O00341 560 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 TNFRSF13BO14836 293 aaPredicted RBP12.78□□□□□ -0.36
SDC3-203ENST00000471567 OGG1O15527 345 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 ZFPL1O95159 310 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 RPS2P15880 293 aaKnown RBP12.78□□□□□ -0.36
SDC3-203ENST00000471567 EGR1P18146 543 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 CD80P33681 288 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 GTF2A1P52655 376 aaPredicted RBP12.78□□□□□ -0.36
SDC3-203ENST00000471567 CDK5R1Q15078 307 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 UBE2V2Q15819 145 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 ESCO2Q56NI9 601 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 RNLSQ5VYX0 342 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 SFRP4Q6FHJ7 346 aaPredicted RBP12.78□□□□□ -0.36
SDC3-203ENST00000471567 UTS2BQ765I0 119 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 ZNF485Q8NCK3 441 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 C19orf18Q8NEA5 215 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 OR8B3Q8NGG8 313 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 AQP3Q92482 292 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 MYDGFQ969H8 173 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 C12orf43Q96C57 262 aaKnown RBP12.78□□□□□ -0.36
SDC3-203ENST00000471567 OR8B2Q96RD0 313 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 LPAR2Q9HBW0 351 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 HIF1ANQ9NWT6 349 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 ERVK-18Q9QC07 812 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
SDC3-203ENST00000471567 CDK1P06493 297 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 ZNF20P17024 532 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 HOXB4P17483 251 aaPredicted RBP12.77□□□□□ -0.37
SDC3-203ENST00000471567 GATA3P23771 443 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 C21orf33P30042 268 aaPredicted RBP12.77□□□□□ -0.37
SDC3-203ENST00000471567 FUT6P51993 359 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 CNN3Q15417 329 aaKnown RBP12.77□□□□□ -0.37
SDC3-203ENST00000471567 MICBQ29980 383 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 CR1LQ2VPA4 569 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 DMRTC1Q5HYR2 192 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 HAGHLQ6PII5 290 aaPredicted RBP12.77□□□□□ -0.37
SDC3-203ENST00000471567 FAM90A1Q86YD7 464 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 DNAAF1Q8NEP3 725 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 OR13C3Q8NGS6 347 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 OR10AC1Q8NH08 325 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 GATAD2BQ8WXI9 593 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 FGGYQ96C11 551 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 ADAT3Q96EY9 351 aaPredicted RBP12.77□□□□□ -0.37
SDC3-203ENST00000471567 PDCD1LG2Q9BQ51 273 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 KAAG1Q9UBP8 84 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 POLDIP2Q9Y2S7 368 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 TPRKBQ9Y3C4 175 aa12.77□□□□□ -0.37
SDC3-203ENST00000471567 PTGES3LE9PB15 166 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.76□□□□□ -0.37
SDC3-203ENST00000471567 J3QT63 122 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 ACAA1P09110 424 aaPredicted RBP12.76□□□□□ -0.37
SDC3-203ENST00000471567 HNF1AP20823 631 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 PRKACBP22694 351 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 MPZP25189 248 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 ZFP36P26651 326 aaKnown RBP12.76□□□□□ -0.37
SDC3-203ENST00000471567 HAAOP46952 286 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 PITPNBP48739 271 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 NPY4RP50391 375 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 TAS2R43P59537 309 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 SEC61A1P61619 476 aaKnown RBP12.76□□□□□ -0.37
SDC3-203ENST00000471567 LCN2P80188 198 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 HOXA4Q00056 320 aaPredicted RBP12.76□□□□□ -0.37
SDC3-203ENST00000471567 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 FAM120AOSQ5T036 256 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 XAF1Q6GPH4 301 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 LYPD2Q6UXB3 125 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 NANOGP1Q8N7R0 232 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 OR51A4Q8NGJ6 313 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
SDC3-203ENST00000471567 CDCA4Q9BXL8 241 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 BEX2Q9BXY8 128 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 PKIBQ9C010 78 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 SHARPINQ9H0F6 387 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 RASL12Q9NYN1 266 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 ERGIC3Q9Y282 383 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 PCDHGB5Q9Y5G0 923 aa12.76□□□□□ -0.37
SDC3-203ENST00000471567 NIPBLQ6KC79 2804 aaeCLIP12.75□□□□□ -0.37
SDC3-203ENST00000471567 A0A0G2JMP0 313 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 A0A0X1KG70 313 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 FAM230AA0A1W2PPH8 454 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 KIAA1324LA8MWY0 1029 aaPredicted RBP12.75□□□□□ -0.37
SDC3-203ENST00000471567 J3QLI3 93 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 MYL12BO14950 172 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 AKR7A2O43488 359 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 ADAM20O43506 726 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 NOS1APO75052 506 aaPredicted RBP12.75□□□□□ -0.37
SDC3-203ENST00000471567 RHBDL1O75783 438 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 ALX3O95076 343 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 GYPAP02724 150 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 ATF1P18846 271 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 GLRA1P23415 457 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 WNT4P56705 351 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 GNB2P62879 340 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 SLC35A2P78381 396 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 C2CD3Q4AC94 2353 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 ATPAF1Q5TC12 328 aaPredicted RBP12.75□□□□□ -0.37
SDC3-203ENST00000471567 DMKNQ6E0U4 476 aaPredicted RBP12.75□□□□□ -0.37
SDC3-203ENST00000471567 ZNF841Q6ZN19 808 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 PARP16Q8N5Y8 322 aa12.75□□□□□ -0.37
SDC3-203ENST00000471567 POC1AQ8NBT0 407 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms