RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ESRRGP62508 458 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 PPIDQ08752 370 aaKnown RBP4.37□□□□□ -1.71
SMC5-202ENST00000471372 RAB31Q13636 194 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 PIGHQ14442 188 aaPredicted RBP4.37□□□□□ -1.71
SMC5-202ENST00000471372 MAPRE2Q15555 327 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 TOMM34Q15785 309 aaPredicted RBP4.37□□□□□ -1.71
SMC5-202ENST00000471372 OR10J3Q5JRS4 329 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 FAM78AQ5JUQ0 283 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 FBXL22Q6P050 247 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 MDP1Q86V88 176 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 CALHM1Q8IU99 346 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 OR51Q1Q8NH59 317 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 RBBP8Q99708 897 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 C7orf50Q9BRJ6 194 aaKnown RBP4.37□□□□□ -1.71
SMC5-202ENST00000471372 PLA2G2FQ9BZM2 168 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 SHCBP1LQ9BZQ2 653 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 TPK1Q9H3S4 243 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 PARVGQ9HBI0 331 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 ZNF222Q9UK12 451 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 AGRNO00468 2067 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 ABCB11O95342 1321 aa4.37□□□□□ -1.71
SMC5-202ENST00000471372 USP42Q9H9J4 1324 aaKnown RBP4.37□□□□□ -1.71
SMC5-202ENST00000471372 MTCL1Q9Y4B5 1905 aaKnown RBP4.36□□□□□ -1.71
SMC5-202ENST00000471372 TDRD6O60522 2096 aaKnown RBP4.36□□□□□ -1.71
SMC5-202ENST00000471372 ADAMTSL3P82987 1691 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 CCL15-CCL14A0A0B4J2E2 113 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 A0A1B0GX12 115 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 ITGB1BP1O14713 200 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 SOCS1O15524 211 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 AQP9O43315 295 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 CCDC22O60826 627 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 YIF1AO95070 293 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 RAB38P57729 211 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 CD164Q04900 197 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 LAMTOR4Q0VGL1 99 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 TRIP13Q15645 432 aaPredicted RBP4.36□□□□□ -1.71
SMC5-202ENST00000471372 CCL15Q16663 113 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 CEACAM16Q2WEN9 425 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 SAXO2Q658L1 398 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 NTM-AS1Q6ZSK4 140 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 Q6ZSR6 202 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 SLC16A13Q7RTY0 426 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 RIMKLAQ8IXN7 391 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 RNF175Q8N4F7 328 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 SPICQ8N5J4 248 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 OR4K5Q8NGD3 323 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 CCDC127Q96BQ5 260 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 ZMYND19Q96E35 227 aaPredicted RBP4.36□□□□□ -1.71
SMC5-202ENST00000471372 ZNF414Q96IQ9 312 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 METTL26Q96S19 204 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 SLC17A9Q9BYT1 436 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 HMG20AQ9NP66 347 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 WSB1Q9Y6I7 421 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 SMAD5-AS1Q9Y6J3 95 aa4.36□□□□□ -1.71
SMC5-202ENST00000471372 A0A1W2PP18 115 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 E2F6O75461 281 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 ADAP1O75689 374 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 DHRS3O75911 302 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 IGLV2-8P01709 118 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 MT-ND4P03905 459 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 ZNF3P17036 446 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 LOXL1Q08397 574 aaPredicted RBP4.35□□□□□ -1.71
SMC5-202ENST00000471372 SYCNQ0VAF6 134 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 MRPL52Q86TS9 123 aaKnown RBP4.35□□□□□ -1.71
SMC5-202ENST00000471372 PGAM4Q8N0Y7 254 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 OR4K17Q8NGC6 315 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 UBA3Q8TBC4 463 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 TNFRSF14Q92956 283 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 NEURL3Q96EH8 262 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 NXF2Q9GZY0 626 aaKnown RBP4.35□□□□□ -1.71
SMC5-202ENST00000471372 DDX19AQ9NUU7 478 aaKnown RBP4.35□□□□□ -1.71
SMC5-202ENST00000471372 FARSAQ9Y285 508 aaKnown RBP4.35□□□□□ -1.71
SMC5-202ENST00000471372 USH1CQ9Y6N9 552 aa4.35□□□□□ -1.71
SMC5-202ENST00000471372 IGHV6-1A0A0B4J1U7 121 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 TMEM213A2RRL7 107 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 PINLYPA6NC86 204 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 NIPSNAP2O75323 286 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 APCSP02743 223 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 PSG2P11465 335 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 PSMB5P28074 263 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 PLTPP55058 493 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 TAS2R31P59538 309 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 PMVKQ15126 192 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 RBM48Q5RL73 367 aaKnown RBP4.34□□□□□ -1.71
SMC5-202ENST00000471372 IDNKQ5T6J7 187 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 MFSD14CQ5VZR4 134 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 SSX7Q7RTT5 188 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 MKXQ8IYA7 352 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 CCNYL1Q8N7R7 359 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 ZNF382Q96SR6 550 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 C1orf109Q9NX04 203 aa4.34□□□□□ -1.71
SMC5-202ENST00000471372 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.33□□□□□ -1.72
SMC5-202ENST00000471372 A0A1B0GTI1 187 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 GOLGA8IPA6NC78 632 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 PRAMEF26H0Y7S4 382 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 H0YJW9 148 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 FOXH1O75593 365 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 MYO1DO94832 1006 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 SNAP29O95721 258 aa4.33□□□□□ -1.72
SMC5-202ENST00000471372 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms