RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CD200R1LQ6Q8B3 271 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 BTNL3Q6UXE8 466 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 LRRN1Q6UXK5 716 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 C12orf54Q6X4T0 127 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 TMPRSS11AQ6ZMR5 421 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 NLRC3Q7RTR2 1065 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 GID4Q8IVV7 300 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 ZNF511Q8NB15 262 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 UFD1Q92890 307 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 DVL3Q92997 716 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-211ENST00000471260 SLC25A46Q96AG3 418 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 NEIL1Q96FI4 390 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-211ENST00000471260 TMEM246Q9BRR3 403 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 TRIM36Q9NQ86 728 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 NUP50Q9UKX7 468 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 GSTK1Q9Y2Q3 226 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 DOCK11Q5JSL3 2073 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 GGT3PA6NGU5 568 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 PRKYO43930 277 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 HMGN1P05114 100 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 GYPBP06028 91 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 CA6P23280 308 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 PMELP40967 661 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 HNRNPA0Q13151 305 aaKnown RBP11.29□□□□□ -0.6
HMGN1-211ENST00000471260 DDI2Q5TDH0 399 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 METAP1DQ6UB28 335 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-211ENST00000471260 LYPD4Q6UWN0 246 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 SHFQ7M4L6 423 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 GDPD1Q8N9F7 314 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 OR8B3Q8NGG8 313 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 OR6K6Q8NGW6 343 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 OR52N1Q8NH53 320 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 SPSB4Q96A44 273 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 KCTD7Q96MP8 289 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 OR8B2Q96RD0 313 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 INTS14Q96SY0 518 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 SLC6A7Q99884 636 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 MARCH7Q9H992 704 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 FN3KRPQ9HA64 309 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 EXOSC4Q9NPD3 245 aaKnown RBP11.29□□□□□ -0.6
HMGN1-211ENST00000471260 CENPMQ9NSP4 180 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 TVP23BQ9NYZ1 205 aa11.29□□□□□ -0.6
HMGN1-211ENST00000471260 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-211ENST00000471260 TMEM89A2RUT3 159 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 NDUFA2O43678 99 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 GLCEO94923 617 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 IGHA1P01876 353 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 CLUP10909 449 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 PSKH1P11801 424 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 PAICSP22234 425 aaKnown RBP11.28□□□□□ -0.6
HMGN1-211ENST00000471260 RBMXP38159 391 aaKnown RBP11.28□□□□□ -0.6
HMGN1-211ENST00000471260 MTNR1AP48039 350 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 NPY4RP50391 375 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 PRKXP51817 358 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 PPP3R1P63098 170 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 ACTG1P63261 375 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 PAX2Q02962 417 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 ASAH1Q13510 395 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 GPR50Q13585 617 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 SNAPC1Q16533 368 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 NDUFA5Q16718 116 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 GLYATL3Q5SZD4 288 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 RBMS3Q6XE24 437 aaKnown RBP11.28□□□□□ -0.6
HMGN1-211ENST00000471260 OR52H1Q8NGJ2 320 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 OR2AE1Q8NHA4 323 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 RNF133Q8WVZ7 376 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 RAB40AQ8WXH6 277 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 ADAT1Q9BUB4 502 aaKnown RBP11.28□□□□□ -0.6
HMGN1-211ENST00000471260 SRRQ9GZT4 340 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 ZMAT3Q9HA38 289 aaKnown RBP11.28□□□□□ -0.6
HMGN1-211ENST00000471260 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 C14orf119Q9NWQ9 140 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 TXNL4BQ9NX01 149 aaKnown RBP11.28□□□□□ -0.6
HMGN1-211ENST00000471260 RNF7Q9UBF6 113 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 ADAM30Q9UKF2 790 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 V9GYH0 126 aa11.28□□□□□ -0.6
HMGN1-211ENST00000471260 IGHV2-70DA0A0C4DH43 119 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 TRDV1A0A1B0GX56 115 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 PHYHO14832 338 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 RGS9O75916 674 aaPredicted RBP11.27□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF205O95201 554 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 HSD11B1P28845 292 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 HTR1FP30939 366 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 TNFSF8P32971 234 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 PSMB10P40306 273 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 PITPNBP48739 271 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 PRSS12P56730 875 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 SCN1BQ07699 218 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 EIF2B1Q14232 305 aaKnown RBP11.27□□□□□ -0.61
HMGN1-211ENST00000471260 TRAM1Q15629 374 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 MPPED2Q15777 294 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 NXNL2Q5VZ03 156 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 CCBE1Q6UXH8 406 aaPredicted RBP11.27□□□□□ -0.61
HMGN1-211ENST00000471260 DPY19L4Q7Z388 723 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 ZDHHC22Q8N966 263 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 OR6N2Q8NGY6 317 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 GCDHQ92947 438 aaPredicted RBP11.27□□□□□ -0.61
HMGN1-211ENST00000471260 DACT3Q96B18 629 aaPredicted RBP11.27□□□□□ -0.61
HMGN1-211ENST00000471260 RNFT2Q96EX2 444 aa11.27□□□□□ -0.61
HMGN1-211ENST00000471260 SDHCQ99643 169 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms