RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 EDARADDQ8WWZ3 215 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF524Q96C55 264 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 INTS12Q96CB8 462 aaKnown RBP8.44□□□□□ -1.06
HDAC3-205ENST00000469550 AKR1E2Q96JD6 320 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 TGM7Q96PF1 710 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 BCL2L14Q9BZR8 327 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 CUTCQ9NTM9 273 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 HRASLS2Q9NWW9 162 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 PPP4R1LQ9P1A2 415 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 GHRLQ9UBU3 117 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 DMRT1Q9Y5R6 373 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 DOPEY2Q9Y3R5 2298 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 NAV2Q8IVL1 2488 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 TMEM269A0A1B0GVZ9 245 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF729A6NN14 1252 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-205ENST00000469550 C21orf140B9A014 251 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 C11orf98E9PRG8 122 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 AP4M1O00189 453 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 NPIPB7O75200 414 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 OR8U8P0C7N1 319 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 CBR1P16152 277 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 GNB3P16520 340 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 NME2P22392 152 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 HSD17B7P56937 341 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 RHEBQ15382 184 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 SURF2Q15527 256 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-205ENST00000469550 PRTGQ2VWP7 1150 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 OPN5Q6U736 354 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 KMT5CQ86Y97 462 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 ST7LQ8TDW4 575 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 ROBO4Q8WZ75 1007 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 ZDHHC12Q96GR4 267 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 OR10C1Q96KK4 312 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 OR6C1Q96RD1 312 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 RTBDNQ9BSG5 229 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-205ENST00000469550 ARV1Q9H2C2 271 aa8.44□□□□□ -1.06
HDAC3-205ENST00000469550 A0A1W2PPE3 182 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 MKRN2OSH3BPM6 223 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 CLN5O75503 358 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 GP1BBP13224 206 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF823P16415 610 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 LAP3P28838 519 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 RAB1AP62820 205 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 SLC9A3R2Q15599 337 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 ANKRD55Q3KP44 614 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 AWAT1Q58HT5 328 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 ATP1A1-AS1Q5TC04 95 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 DNM1P34Q6PK57 102 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 Q6ZRG5 221 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 MARCH3Q86UD3 253 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 OOSP2Q86WS3 158 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 UBAC2Q8NBM4 344 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 BHLHE23Q8NDY6 225 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 SLC26A10Q8NG04 563 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 OR52N4Q8NGI2 321 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 SLC22A8Q8TCC7 542 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 SECTM1Q8WVN6 248 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 FGGYQ96C11 551 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 SCRT1Q9BWW7 348 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 LPAR5Q9H1C0 372 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 RGCCQ9H4X1 137 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 METTL8Q9H825 291 aaKnown RBP8.43□□□□□ -1.06
HDAC3-205ENST00000469550 ZNF71Q9NQZ8 489 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-205ENST00000469550 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 SRPK3Q9UPE1 567 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 TP53TG5Q9Y2B4 290 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 SPTBP11277 2137 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 MPDZO75970 2070 aa8.43□□□□□ -1.06
HDAC3-205ENST00000469550 A0A0A6YYC8 382 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 A6NIZ1 184 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 I3L1I5 382 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 P2RY10O00398 339 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 HCRTR1O43613 425 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 LMX1BO60663 402 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 RPS2P15880 293 aaKnown RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 SNCAP37840 140 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 HTR5AP47898 357 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 SUCLG1P53597 346 aaKnown RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 EMP2P54851 167 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 RAP1BP61224 184 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 RAP1AP62834 184 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 EBPQ15125 230 aaKnown RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 IGFBP7Q16270 282 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 C1QL3Q5VWW1 255 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 OTPQ5XKR4 325 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 HIST2H3AQ71DI3 136 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 PPP1R3BQ86XI6 285 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 CARFQ8N187 725 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 WDSUB1Q8N9V3 476 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 OR9K2Q8NGE7 335 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 OR5D14Q8NGL3 314 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 OR1J1Q8NGS3 322 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 OR51F2Q8NH61 342 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 EMG1Q92979 244 aaKnown RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 FOXN4Q96NZ1 517 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 PAPOLGQ9BWT3 736 aaKnown RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 GPR87Q9BY21 358 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 FAM212BQ9NTI7 297 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-205ENST00000469550 PADI1Q9ULC6 663 aa8.42□□□□□ -1.06
HDAC3-205ENST00000469550 OSGIN2Q9Y236 505 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms