RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TMEM38AQ9H6F2 299 aa8.85□□□□□ -0.99
NUP50-214ENST00000469163 ZNF701Q9NV72 531 aaPredicted RBP8.85□□□□□ -0.99
NUP50-214ENST00000469163 SLC2A8Q9NY64 477 aa8.85□□□□□ -0.99
NUP50-214ENST00000469163 P2RX2Q9UBL9 471 aa8.85□□□□□ -0.99
NUP50-214ENST00000469163 COPS7AQ9UBW8 275 aa8.85□□□□□ -0.99
NUP50-214ENST00000469163 SPG11Q96JI7 2443 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 HELZP42694 1942 aaKnown RBP8.84□□□□□ -0.99
NUP50-214ENST00000469163 A0A1W2PR77 199 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 TLCD2A6NGC4 264 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 GLSO94925 669 aaPredicted RBP8.84□□□□□ -0.99
NUP50-214ENST00000469163 FGF5P12034 268 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 TCN2P20062 427 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 FPR2P25090 351 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 PSMB6P28072 239 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 IL12BP29460 328 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 HIKESHIQ53FT3 197 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 PRAMEF5Q5TYX0 476 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 PRAMEF6Q5VXH4 476 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 PRSS57Q6UWY2 283 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 C1orf87Q8N0U7 546 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 SPRYD4Q8WW59 207 aaPredicted RBP8.84□□□□□ -0.99
NUP50-214ENST00000469163 REEP6Q96HR9 211 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 DCBLD2Q96PD2 775 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 POLR2J3Q9H1A7 115 aaKnown RBP8.84□□□□□ -0.99
NUP50-214ENST00000469163 A0A1W2PQM1 296 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 TMEM129A0AVI4 362 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 TLX3O43711 291 aaPredicted RBP8.84□□□□□ -0.99
NUP50-214ENST00000469163 LRP3O75074 770 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 ATP1B1P05026 303 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 TDGF1P13385 188 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 HTD2P86397 168 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 HSF1Q00613 529 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 RAB11BQ15907 218 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 GGTA1PQ4G0N0 100 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 FBLN7Q53RD9 439 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 Q6ZRG5 221 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 CEACAM19Q7Z692 300 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 TMEM183AQ8IXX5 376 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 SLC38A9Q8NBW4 561 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 OR5P2Q8WZ92 322 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 MCHR2Q969V1 340 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 OR7D2Q96RA2 312 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 SLCO5A1Q9H2Y9 848 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 ZNF552Q9H707 407 aaPredicted RBP8.84□□□□□ -0.99
NUP50-214ENST00000469163 TMEM100Q9NV29 134 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 ENTPD2Q9Y5L3 495 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 SHISA8B8ZZ34 492 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 EEF1E1-BLOC1S5C9J1V9 151 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 H3BML4 177 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 H7C417 338 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 SRPX2O60687 465 aaPredicted RBP8.84□□□□□ -0.99
NUP50-214ENST00000469163 H1F0P07305 194 aaKnown RBP8.84□□□□□ -0.99
NUP50-214ENST00000469163 SP9P0CG40 484 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 MMDQ15546 238 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 SYT14P1Q58G82 188 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 LINC00696Q6ZRV3 163 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 ERASQ7Z444 233 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 TMEM156Q8N614 296 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 ZNF738Q8NE65 137 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 WFDC6Q9BQY6 131 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 NUDT9Q9BW91 350 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 CHST6Q9GZX3 395 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 CHST8Q9H2A9 424 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 KLRF1Q9NZS2 232 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 PAM16Q9Y3D7 125 aa8.84□□□□□ -0.99
NUP50-214ENST00000469163 A0A0A6YYH2 397 aa8.83□□□□□ -1
NUP50-214ENST00000469163 CENPVL1A0A0U1RR11 272 aa8.83□□□□□ -1
NUP50-214ENST00000469163 A6NJ64 397 aa8.83□□□□□ -1
NUP50-214ENST00000469163 CER1O95813 267 aa8.83□□□□□ -1
NUP50-214ENST00000469163 CEACAM1P13688 526 aa8.83□□□□□ -1
NUP50-214ENST00000469163 FAUP35544 74 aaKnown RBP8.83□□□□□ -1
NUP50-214ENST00000469163 MTNR1AP48039 350 aa8.83□□□□□ -1
NUP50-214ENST00000469163 NPY4RP50391 375 aa8.83□□□□□ -1
NUP50-214ENST00000469163 NKPD1Q17RQ9 610 aa8.83□□□□□ -1
NUP50-214ENST00000469163 SLC48A1Q6P1K1 146 aa8.83□□□□□ -1
NUP50-214ENST00000469163 OR10W1Q8NGF6 305 aa8.83□□□□□ -1
NUP50-214ENST00000469163 STT3BQ8TCJ2 826 aa8.83□□□□□ -1
NUP50-214ENST00000469163 SFXN5Q8TD22 340 aa8.83□□□□□ -1
NUP50-214ENST00000469163 CMBLQ96DG6 245 aa8.83□□□□□ -1
NUP50-214ENST00000469163 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
NUP50-214ENST00000469163 RAB22AQ9UL26 194 aa8.83□□□□□ -1
NUP50-214ENST00000469163 POLR3KQ9Y2Y1 108 aaPredicted RBP8.83□□□□□ -1
NUP50-214ENST00000469163 DCDC2BA2VCK2 349 aa8.83□□□□□ -1
NUP50-214ENST00000469163 C11orf98E9PRG8 122 aa8.83□□□□□ -1
NUP50-214ENST00000469163 GPR75O95800 540 aa8.83□□□□□ -1
NUP50-214ENST00000469163 CELA2AP08217 269 aa8.83□□□□□ -1
NUP50-214ENST00000469163 CD14P08571 375 aa8.83□□□□□ -1
NUP50-214ENST00000469163 LIMS3P0CW19 117 aa8.83□□□□□ -1
NUP50-214ENST00000469163 LIMS4P0CW20 117 aa8.83□□□□□ -1
NUP50-214ENST00000469163 APOBEC3AP31941 199 aaPredicted RBP8.83□□□□□ -1
NUP50-214ENST00000469163 TAF9Q16594 264 aa8.83□□□□□ -1
NUP50-214ENST00000469163 SAMD13Q5VXD3 122 aa8.83□□□□□ -1
NUP50-214ENST00000469163 SLC35D2Q76EJ3 337 aa8.83□□□□□ -1
NUP50-214ENST00000469163 GBGT1Q8N5D6 347 aa8.83□□□□□ -1
NUP50-214ENST00000469163 OR4K17Q8NGC6 315 aa8.83□□□□□ -1
NUP50-214ENST00000469163 OR4D6Q8NGJ1 314 aa8.83□□□□□ -1
NUP50-214ENST00000469163 ORAOV1Q8WV07 137 aa8.83□□□□□ -1
NUP50-214ENST00000469163 RAB39BQ96DA2 213 aa8.83□□□□□ -1
NUP50-214ENST00000469163 MUCL1Q96DR8 90 aa8.83□□□□□ -1
NUP50-214ENST00000469163 CMKLR1Q99788 373 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms