RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ZFP36P26651 326 aaKnown RBP16.73■□□□□ 0.27
NPHP4-206ENST00000468253 FUT6P51993 359 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 UBE2V2Q15819 145 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 CR1LQ2VPA4 569 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 C11orf91Q3C1V1 193 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 CHRFAM7AQ494W8 412 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 ESCO2Q56NI9 601 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 ATPAF1Q5TC12 328 aaPredicted RBP16.73■□□□□ 0.27
NPHP4-206ENST00000468253 SFRP4Q6FHJ7 346 aaPredicted RBP16.73■□□□□ 0.27
NPHP4-206ENST00000468253 ZNF485Q8NCK3 441 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 OR5AK2Q8NH90 309 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 RPS4Y2Q8TD47 263 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 AQP3Q92482 292 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 BEX2Q9BXY8 128 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 COMMD4Q9H0A8 199 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 SHARPINQ9H0F6 387 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 GPR173Q9NS66 373 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 SCN3BQ9NY72 215 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 RASL12Q9NYN1 266 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 ERVK-18Q9QC07 812 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 KAAG1Q9UBP8 84 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 CLEC2DQ9UHP7 191 aa16.73■□□□□ 0.27
NPHP4-206ENST00000468253 A6NIN4 97 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 C3orf80F5H4A9 247 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 J3QLI3 93 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 NOS1APO75052 506 aaPredicted RBP16.72■□□□□ 0.27
NPHP4-206ENST00000468253 ALX3O95076 343 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 RPS2P15880 293 aaKnown RBP16.72■□□□□ 0.27
NPHP4-206ENST00000468253 HNF1AP20823 631 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 VHLP40337 213 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 NPY4RP50391 375 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 FAM120AOSQ5T036 256 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 IZUMO2Q6UXV1 221 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 STX19Q8N4C7 294 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 TEX29Q8N6K0 151 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 BOLLQ8N9W6 283 aaKnown RBP16.72■□□□□ 0.27
NPHP4-206ENST00000468253 DNAAF1Q8NEP3 725 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 OR8B3Q8NGG8 313 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 FGGYQ96C11 551 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 OR8B2Q96RD0 313 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 DNTTIP1Q9H147 329 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 LPAR2Q9HBW0 351 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 RAB26Q9ULW5 256 aa16.72■□□□□ 0.27
NPHP4-206ENST00000468253 A0A0G2JMP0 313 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 A0A0X1KG70 313 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.71■□□□□ 0.27
NPHP4-206ENST00000468253 MT-ND2P03891 347 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 MPZP25189 248 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 OR2G6Q5TZ20 316 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 ZNF841Q6ZN19 808 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 FAM90A1Q86YD7 464 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 OR4M2Q8NGB6 313 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 GATAD2BQ8WXI9 593 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 MYDGFQ969H8 173 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 ADAT3Q96EY9 351 aaPredicted RBP16.71■□□□□ 0.27
NPHP4-206ENST00000468253 PCDHGB5Q9Y5G0 923 aa16.71■□□□□ 0.27
NPHP4-206ENST00000468253 ABCA2Q9BZC7 2435 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 KIAA1324LA8MWY0 1029 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-206ENST00000468253 EGR1P18146 543 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 PRKACBP22694 351 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 C21orf33P30042 268 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-206ENST00000468253 CD80P33681 288 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 HAAOP46952 286 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 PITPNBP48739 271 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 GTF2A1P52655 376 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-206ENST00000468253 LCN2P80188 198 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 CDK5R1Q15078 307 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 CNN3Q15417 329 aaKnown RBP16.7■□□□□ 0.26
NPHP4-206ENST00000468253 HAGHLQ6PII5 290 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-206ENST00000468253 LYPD2Q6UXB3 125 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 C19orf18Q8NEA5 215 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 POM121Q96HA1 1249 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 SSBP3Q9BWW4 388 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-206ENST00000468253 CDCA4Q9BXL8 241 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 PKIBQ9C010 78 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 NEK6Q9HC98 313 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 ERGIC3Q9Y282 383 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 POLDIP2Q9Y2S7 368 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 RRP15Q9Y3B9 282 aaKnown RBP16.7■□□□□ 0.26
NPHP4-206ENST00000468253 TPRKBQ9Y3C4 175 aa16.7■□□□□ 0.26
NPHP4-206ENST00000468253 TRAPPC2LH3BP13 241 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 H3BSH0 61 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 J3QT63 122 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 CDK1P06493 297 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 ZNF20P17024 532 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 ATF1P18846 271 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 GNB2P62879 340 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 IL24Q13007 206 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 DMRTC1Q5HYR2 192 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 DCAF12L2Q5VW00 463 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 WDR25Q64LD2 544 aaPredicted RBP16.69■□□□□ 0.26
NPHP4-206ENST00000468253 FAHD2BQ6P2I3 314 aaPredicted RBP16.69■□□□□ 0.26
NPHP4-206ENST00000468253 AHSA2Q719I0 299 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 SERPINA12Q8IW75 414 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 PARP16Q8N5Y8 322 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 NANOGP1Q8N7R0 232 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 OR51A4Q8NGJ6 313 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 OR5D14Q8NGL3 314 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 OR13C3Q8NGS6 347 aa16.69■□□□□ 0.26
NPHP4-206ENST00000468253 OR10AC1Q8NH08 325 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms