RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 TRAV38-1A0A0B4J264 116 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 CEACAM18A8MTB9 384 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 F5H0A9 414 aaPredicted RBP11.39□□□□□ -0.59
SSBP1-206ENST00000467681 DENRO43583 198 aaKnown RBP11.39□□□□□ -0.59
SSBP1-206ENST00000467681 NDUFA2O43678 99 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 GATBO75879 557 aaKnown RBP11.39□□□□□ -0.59
SSBP1-206ENST00000467681 LALBAP00709 142 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 MSMBP08118 114 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 EGR1P18146 543 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 DVL1P1P54792 670 aaPredicted RBP11.39□□□□□ -0.59
SSBP1-206ENST00000467681 SLC35A2P78381 396 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 HOXA4Q00056 320 aaPredicted RBP11.39□□□□□ -0.59
SSBP1-206ENST00000467681 CDK5R1Q15078 307 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 KCNJ8Q15842 424 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 TEX36Q5VZQ5 186 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 ZNF573Q86YE8 665 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 OR51A4Q8NGJ6 313 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 AQP3Q92482 292 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 CNBD2Q96M20 576 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 ZNF184Q99676 751 aaPredicted RBP11.39□□□□□ -0.59
SSBP1-206ENST00000467681 COMMD4Q9H0A8 199 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 PLEKHA1Q9HB21 404 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 TRIM36Q9NQ86 728 aa11.39□□□□□ -0.59
SSBP1-206ENST00000467681 OOEPA6NGQ2 149 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 SRRM5B3KS81 715 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 C3orf80F5H4A9 247 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.38□□□□□ -0.59
SSBP1-206ENST00000467681 RHBDL1O75783 438 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 MUC1P15941 1255 aaPredicted RBP11.38□□□□□ -0.59
SSBP1-206ENST00000467681 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
SSBP1-206ENST00000467681 ZNF20P17024 532 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 ATF1P18846 271 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 CRHBPP24387 322 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
SSBP1-206ENST00000467681 CD80P33681 288 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 FUT6P51993 359 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 IRF3Q14653 427 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 DMKNQ6E0U4 476 aaPredicted RBP11.38□□□□□ -0.59
SSBP1-206ENST00000467681 HAGHLQ6PII5 290 aaPredicted RBP11.38□□□□□ -0.59
SSBP1-206ENST00000467681 LYPD2Q6UXB3 125 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 DCDC5Q6ZRR9 648 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 DNAAF1Q8NEP3 725 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 OR13C3Q8NGS6 347 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 OR51F2Q8NH61 342 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 SGCDQ92629 289 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 TMEM186Q96B77 213 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 LPAR2Q9HBW0 351 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 PAK1IP1Q9NWT1 392 aaPredicted RBP11.38□□□□□ -0.59
SSBP1-206ENST00000467681 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 KCNS2Q9ULS6 477 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 ZNF281Q9Y2X9 895 aa11.38□□□□□ -0.59
SSBP1-206ENST00000467681 TRAV20A0A0B4J274 112 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 IGKV1-9A0A0C4DH69 117 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 FAM230AA0A1W2PPH8 454 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 INAFM1C9JVW0 142 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 FOXH1O75593 365 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 ALX3O95076 343 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 ACAA1P09110 424 aaPredicted RBP11.37□□□□□ -0.59
SSBP1-206ENST00000467681 PRKACBP22694 351 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 HAAOP46952 286 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 WNT4P56705 351 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 MICBQ29980 383 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 ANGPTL5Q86XS5 388 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 FAM90A1Q86YD7 464 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 PARP16Q8N5Y8 322 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 OR5D14Q8NGL3 314 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 GPR148Q8TDV2 347 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 RGP1Q92546 391 aaPredicted RBP11.37□□□□□ -0.59
SSBP1-206ENST00000467681 GHSRQ92847 366 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 C12orf43Q96C57 262 aaKnown RBP11.37□□□□□ -0.59
SSBP1-206ENST00000467681 SMIM19Q96E16 107 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 NEIL1Q96FI4 390 aaPredicted RBP11.37□□□□□ -0.59
SSBP1-206ENST00000467681 RASSF4Q9H2L5 321 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 Q9H521 79 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 ZCCHC4Q9H5U6 513 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 HIF1ANQ9NWT6 349 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 DHDHQ9UQ10 334 aa11.37□□□□□ -0.59
SSBP1-206ENST00000467681 POLR3KQ9Y2Y1 108 aaPredicted RBP11.37□□□□□ -0.59
SSBP1-206ENST00000467681 IGKV1-27A0A075B6S5 117 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 IGHV3OR15-7A0A075B7D8 119 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 PPIAL4CA0A0B4J2A2 164 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 J3QT63 122 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 MYL12BO14950 172 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 AKR7A2O43488 359 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 RGS10O43665 173 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 NOS1APO75052 506 aaPredicted RBP11.36□□□□□ -0.59
SSBP1-206ENST00000467681 MT-ND2P03891 347 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 CD1AP06126 327 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 RPS2P15880 293 aaKnown RBP11.36□□□□□ -0.59
SSBP1-206ENST00000467681 MPZP25189 248 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 TAS2R43P59537 309 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 ESCO2Q56NI9 601 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 RBM48Q5RL73 367 aaKnown RBP11.36□□□□□ -0.59
SSBP1-206ENST00000467681 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
SSBP1-206ENST00000467681 ZNF841Q6ZN19 808 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 NLRC3Q7RTR2 1065 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 GLCCI1Q86VQ1 547 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 SERPINA12Q8IW75 414 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 ZFP41Q8N8Y5 198 aa11.36□□□□□ -0.59
SSBP1-206ENST00000467681 TRMT10AQ8TBZ6 339 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms