RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 OR5A2Q8NGI9 324 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 ITFG2Q969R8 447 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 NRBF2Q96F24 287 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 DUS3LQ96G46 650 aaKnown RBP14.41□□□□□ -0.1
COL7A1-206ENST00000466591 GAFA1Q96PS6 74 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 SEMA6AQ9H2E6 1030 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 PLEKHA1Q9HB21 404 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 ENOPH1Q9UHY7 261 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 hCG_1809904A0A1W2PP81 198 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 A0A1W2PPE2 198 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 A0A1W2PR64 198 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 A0A1W2PRV1 198 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 SLC22A31A6NKX4 558 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 ZNF670-ZNF695F2Z2N8 137 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 SLC1A7O00341 560 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 SIGLEC5O15389 551 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 ANGPTL7O43827 346 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 FCN3O75636 299 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 RHBDL1O75783 438 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 TFF1P04155 84 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 ACAA1P09110 424 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-206ENST00000466591 FAHP16930 419 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 SLC2A5P22732 501 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 SRSF4Q08170 494 aaKnown RBP14.4□□□□□ -0.1
COL7A1-206ENST00000466591 PTGES3Q15185 160 aaKnown RBP14.4□□□□□ -0.1
COL7A1-206ENST00000466591 DMRTC1Q5HYR2 192 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 METAP1DQ6UB28 335 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-206ENST00000466591 OR5D13Q8NGL4 314 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 ANGPTL6Q8NI99 470 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 OR8B4Q96RC9 309 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 MOB1AQ9H8S9 216 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 TCF7L1Q9HCS4 588 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 FAM206AQ9NX38 181 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 VPREB3Q9UKI3 123 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 POLDIP2Q9Y2S7 368 aa14.4□□□□□ -0.1
COL7A1-206ENST00000466591 SF3B6Q9Y3B4 125 aaKnown RBP14.4□□□□□ -0.1
COL7A1-206ENST00000466591 TRBV23-1A0A0A0MS06 115 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 G3V2T6 193 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 RNASEK-C17orf49H0YIS7 233 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 M0R1W7 72 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 DHRS3O75911 302 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 NRASP01111 189 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 DCTDP32321 178 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 SAA4P35542 130 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 ATP6V1E1P36543 226 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 HAAOP46952 286 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 CAV3P56539 151 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 CXCR4P61073 352 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 RELBQ01201 579 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 MIDNQ504T8 468 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 ZBTB37Q5TC79 503 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 ZNF322Q6U7Q0 402 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-206ENST00000466591 ZNF573Q86YE8 665 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 SLC35F2Q8IXU6 374 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 ZNRF1Q8ND25 227 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 OR51G2Q8NGK0 314 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 OR5R1Q8NH85 324 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 OR5K1Q8NHB7 308 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 FAM234AQ9H0X4 552 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 OR51I2Q9H344 312 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 ELL3Q9HB65 397 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-206ENST00000466591 RASL12Q9NYN1 266 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 ZNRD1Q9P1U0 126 aa14.39□□□□□ -0.11
COL7A1-206ENST00000466591 TCRBV3S1A0A5B6 114 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 PRKYO43930 277 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 NXPH2O95156 264 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 PSG2P11465 335 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 TGFBR2P37173 567 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 UBE2E1P51965 193 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 DLX1P56177 255 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 DEFA6Q01524 100 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 ACSM1Q08AH1 577 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 FAM76BQ5HYJ3 339 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 CLVS2Q5SYC1 327 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 ASRGL1Q7L266 308 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 MEPCEQ7L2J0 689 aaKnown RBP14.38□□□□□ -0.11
COL7A1-206ENST00000466591 GID4Q8IVV7 300 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 PNKDQ8N490 385 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 TCEANCQ8N8B7 351 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 C8orf46Q8TAG6 207 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 MNTQ99583 582 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 ADI1Q9BV57 179 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 OR14J1Q9UGF5 321 aa14.38□□□□□ -0.11
COL7A1-206ENST00000466591 NUFIP1Q9UHK0 495 aaKnown RBP14.38□□□□□ -0.11
COL7A1-206ENST00000466591 CCDC182A6NF36 153 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 DYNC1I1O14576 645 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 KRT8P05787 483 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 AMY2BP19961 511 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 RASSF2P50749 326 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 DAPP51397 102 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 LGALS4P56470 323 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 ROM1Q03395 351 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 MFGE8Q08431 387 aaPredicted RBP14.37□□□□□ -0.11
COL7A1-206ENST00000466591 C1orf122Q6ZSJ8 110 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 ZDHHC13Q8IUH4 622 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 YIPF7Q8N8F6 280 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 LINC01006Q8NI28 216 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 AQP3Q92482 292 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 APOL4Q9BPW4 351 aa14.37□□□□□ -0.11
COL7A1-206ENST00000466591 PPA2Q9H2U2 334 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms