RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ZNF613Q6PF04 617 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 DHRS4L2Q6PKH6 230 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 DPY19L4Q7Z388 723 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 CALHM1Q8IU99 346 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 FOXRED2Q8IWF2 684 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 NRACQ8N912 160 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 SPATA4Q8NEY3 305 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 NDNFQ8TB73 568 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 BCAS4Q8TDM0 211 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 LRRC8CQ8TDW0 803 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 SLC7A6Q92536 515 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 HDAC2Q92769 488 aaKnown RBP4.53□□□□□ -1.68
NCL-208ENST00000466274 SLCO4A1Q96BD0 722 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 RBM14Q96PK6 669 aaKnown RBP4.53□□□□□ -1.68
NCL-208ENST00000466274 BCL2L10Q9HD36 194 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 ISYNA1Q9NPH2 558 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 ASIC5Q9NY37 505 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 HAO2Q9NYQ3 351 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 ANGPT4Q9Y264 503 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 HILPDAQ9Y5L2 63 aa4.53□□□□□ -1.68
NCL-208ENST00000466274 ODF3BA8MYP8 253 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 E9PBE3 544 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 BHLHE40O14503 412 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 RFXANKO14593 260 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 CHP2O43745 196 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 PTP4A3O75365 173 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 ACAA1P09110 424 aaPredicted RBP4.52□□□□□ -1.69
NCL-208ENST00000466274 IGHV1-8P0DP01 117 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 ARSBP15848 533 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 RHCEP18577 417 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 CCT5P48643 541 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 CAPZA1P52907 286 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 LSM6P62312 80 aaKnown RBP4.52□□□□□ -1.69
NCL-208ENST00000466274 ELF3P78545 371 aaPredicted RBP4.52□□□□□ -1.69
NCL-208ENST00000466274 GABPB1Q06547 395 aaPredicted RBP4.52□□□□□ -1.69
NCL-208ENST00000466274 SNAPC1Q16533 368 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 PNLIPRP3Q17RR3 467 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 DEFB136Q30KP8 78 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 NANOGP8Q6NSW7 305 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 C8orf74Q6P047 294 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 TMEM65Q6PI78 240 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 CEMP1Q6PRD7 247 aaPredicted RBP4.52□□□□□ -1.69
NCL-208ENST00000466274 ZBTB49Q6ZSB9 765 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 EGFL6Q8IUX8 553 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 GJC3Q8NFK1 279 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 OR11H1Q8NG94 326 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 OR11H6Q8NGC7 330 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 OR5T2Q8NGG2 359 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 C4orf3Q8WVX3 66 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 MPP4Q96JB8 637 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 GAFA1Q96PS6 74 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 RAB3IPQ96QF0 476 aaPredicted RBP4.52□□□□□ -1.69
NCL-208ENST00000466274 COQ7Q99807 217 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 THAP7Q9BT49 309 aaPredicted RBP4.52□□□□□ -1.69
NCL-208ENST00000466274 HDHD2Q9H0R4 259 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 TSPYL1Q9H0U9 437 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 PAPOLBQ9NRJ5 636 aaKnown RBP4.52□□□□□ -1.69
NCL-208ENST00000466274 POLR1DQ9Y2S0 133 aa4.52□□□□□ -1.69
NCL-208ENST00000466274 ANKRD30BLA7E2S9 258 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 KPNA4O00629 521 aaPredicted RBP4.51□□□□□ -1.69
NCL-208ENST00000466274 SOCS2O14508 198 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 OVOL1O14753 267 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 HSPA12AO43301 675 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 SERPINB7O75635 380 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 ANP32DO95626 131 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 RBP4P02753 201 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 LCATP04180 440 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 CHRNGP07510 517 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 FAM106CPP0CH98 169 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 SELLP14151 372 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 FUT1P19526 365 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 GNALP38405 381 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 AQP2P41181 271 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 KIR3DL2P43630 455 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 GABRA2P47869 451 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 MVDP53602 400 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 RPL27P61353 136 aaKnown RBP4.51□□□□□ -1.69
NCL-208ENST00000466274 PMS2P11Q13670 270 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 GFOD2Q3B7J2 385 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 CCDC92Q53HC0 331 aaPredicted RBP4.51□□□□□ -1.69
NCL-208ENST00000466274 SPANXN4Q5MJ08 99 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 WDR82Q6UXN9 313 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 CFAP77Q6ZQR2 320 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 TSEN54Q7Z6J9 526 aaKnown RBP4.51□□□□□ -1.69
NCL-208ENST00000466274 CYB561A3Q8NBI2 242 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 TMEM185AQ8NFB2 350 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 OR1M1Q8NGA1 313 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 OR10Z1Q8NGY1 313 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 ZIM3Q96PE6 472 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 OR52E6Q96RD3 313 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 ZBTB18Q99592 522 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 MCHR1Q99705 422 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 C1orf21Q9H246 121 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 RAD21L1Q9H4I0 556 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 CCDC134Q9H6E4 229 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 WDR55Q9H6Y2 383 aaPredicted RBP4.51□□□□□ -1.69
NCL-208ENST00000466274 SNTG1Q9NSN8 517 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 DNAJB9Q9UBS3 223 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 MOB4Q9Y3A3 225 aa4.51□□□□□ -1.69
NCL-208ENST00000466274 SAR1BQ9Y6B6 198 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms