RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 GABRA6Q16445 453 aa16.14■□□□□ 0.17
CAPN3-209ENST00000466222 TMEM244Q5VVB8 128 aa16.14■□□□□ 0.17
CAPN3-209ENST00000466222 ASPHD2Q6ICH7 369 aa16.14■□□□□ 0.17
CAPN3-209ENST00000466222 TAS2R4Q9NYW5 299 aa16.14■□□□□ 0.17
CAPN3-209ENST00000466222 TMA7Q9Y2S6 64 aaKnown RBP16.14■□□□□ 0.17
CAPN3-209ENST00000466222 LOC390937A0A1W2PQ73 354 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 KDM4BO94953 1096 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 RAB6AP20340 208 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 S100A11P31949 105 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 HTR5AP47898 357 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 MMP16P51512 607 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 GUCA2AQ02747 115 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 SCRN3Q0VDG4 424 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 C1orf100Q5SVJ3 147 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 RHOUQ7L0Q8 258 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 ZNF283Q8N7M2 679 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 OR51S1Q8NGJ8 323 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 OR1F12Q8NHA8 337 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 SOX7Q9BT81 388 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 SFXN3Q9BWM7 321 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 C1QTNF6Q9BXI9 259 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 PBOV1Q9GZY1 135 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 CACNA1BQ00975 2339 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 OR6C6A6NF89 314 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 EEF1E1-BLOC1S5C9J1V9 151 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 LDLRAD4O15165 306 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 RP2O75695 350 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 UBCP0CG48 685 aaKnown RBP16.13■□□□□ 0.17
CAPN3-209ENST00000466222 PPP3CBP16298 524 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 COX5AP20674 150 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 CRYGSP22914 178 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 CALCRP30988 508 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 SLC6A9P48067 706 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 PCBD1P61457 104 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 BAMBIQ13145 260 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 RAB35Q15286 201 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 FAM57BQ71RH2 274 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 BIVMQ86UB2 503 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 ZNF584Q8IVC4 421 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 OR52B4Q8NGK2 314 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 DMRTA2Q96SC8 542 aa16.13■□□□□ 0.17
CAPN3-209ENST00000466222 GTF3C1Q12789 2109 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 LOC100509620A0A075B734 347 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 H3BUI4 141 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 P2RY10O00398 339 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 CNOT4O95628 575 aaKnown RBP16.12■□□□□ 0.17
CAPN3-209ENST00000466222 CD3DP04234 171 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 MDP1Q86V88 176 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 MYPOPQ86VE0 399 aaPredicted RBP16.12■□□□□ 0.17
CAPN3-209ENST00000466222 PLPP7Q8NBV4 271 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 OR13C3Q8NGS6 347 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 TNFAIP8L1Q8WVP5 186 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 SEH1LQ96EE3 360 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 KCNN3Q9UGI6 736 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 MEMO1Q9Y316 297 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 NBASA2RRP1 2371 aa16.12■□□□□ 0.17
CAPN3-209ENST00000466222 ZSCAN5BA6NJL1 495 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 M0R135 149 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 LMX1BO60663 402 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 AGFG2O95081 481 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 RAB3DO95716 219 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 TTRP02766 147 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 OTX1P32242 354 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-209ENST00000466222 GRB2P62993 217 aaKnown RBP16.11■□□□□ 0.17
CAPN3-209ENST00000466222 TGFBR3Q03167 851 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 GFOD2Q3B7J2 385 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 RAB12Q6IQ22 244 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 MUC20Q8N307 709 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-209ENST00000466222 OR8B12Q8NGG6 310 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 OR4D10Q8NGI6 311 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 SCARB1Q8WTV0 552 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 ZNF799Q96GE5 643 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 BBC3Q96PG8 261 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-209ENST00000466222 hCG_1807616A0A1W2PRN6 198 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 A8MXE2 369 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 GOSR2O14653 212 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 CD74P04233 296 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 CELA3BP08861 270 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 ZNF35P13682 527 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 CCNOP22674 350 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 CA7P43166 264 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 PRSS12P56730 875 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 FAM27E3Q08E93 113 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 HLXQ14774 488 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-209ENST00000466222 SNAI3Q3KNW1 292 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 GLYATL3Q5SZD4 288 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 BEND4Q6ZU67 534 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 TMUB2Q71RG4 321 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 RELL2Q8NC24 303 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-209ENST00000466222 RBPMSQ93062 196 aaKnown RBP16.11■□□□□ 0.17
CAPN3-209ENST00000466222 WBP1Q96G27 269 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 VKORC1Q9BQB6 163 aa16.11■□□□□ 0.17
CAPN3-209ENST00000466222 LOC107986453A0A1B0GWG9 222 aa16.1■□□□□ 0.17
CAPN3-209ENST00000466222 SCGNO76038 276 aa16.1■□□□□ 0.17
CAPN3-209ENST00000466222 ZMYND11Q15326 602 aa16.1■□□□□ 0.17
CAPN3-209ENST00000466222 IGFBP7Q16270 282 aa16.1■□□□□ 0.17
CAPN3-209ENST00000466222 EIF2S3LQ2VIR3 472 aaKnown RBP16.1■□□□□ 0.17
CAPN3-209ENST00000466222 WDR31Q8NA23 367 aa16.1■□□□□ 0.17
CAPN3-209ENST00000466222 OR51E1Q8TCB6 317 aa16.1■□□□□ 0.17
CAPN3-209ENST00000466222 TMEM138Q9NPI0 162 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms